Gene : Gorai.004G016400 G. raimondii v2.1
Defline:  (1 of 5) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  164
Name:  ? Gorai.004G016400 Secondary Identifier:  ? PAC:26773690
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5098 Gossypium raimondii pathologic  
Graimondii PWY-6927 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G016400 0.5kb upstream 0.5kb upstream 4232 true Chr04: 1165053-1169284 Gossypium raimondii
Gorai.004G016400 0.5kb upstream 0.5kb upstream 500 false Chr04: 1168785-1169284 Gossypium raimondii
Gorai.004G016400 0.5kb downstream 0.5kb downstream 4232 true Chr04: 1164553-1168784 Gossypium raimondii
Gorai.004G016400 0.5kb downstream 0.5kb downstream 500 false Chr04: 1164553-1165052 Gossypium raimondii
Gorai.004G016400 1.0kb upstream 1.0kb upstream 4732 true Chr04: 1165053-1169784 Gossypium raimondii
Gorai.004G016400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1168785-1169784 Gossypium raimondii
Gorai.004G016400 1.0kb downstream 1.0kb downstream 4732 true Chr04: 1164053-1168784 Gossypium raimondii
Gorai.004G016400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1164053-1165052 Gossypium raimondii
Gorai.004G016400 2.0kb upstream 2.0kb upstream 5732 true Chr04: 1165053-1170784 Gossypium raimondii
Gorai.004G016400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1168785-1170784 Gossypium raimondii
Gorai.004G016400 2.0kb downstream 2.0kb downstream 5732 true Chr04: 1163053-1168784 Gossypium raimondii
Gorai.004G016400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1163053-1165052 Gossypium raimondii
Gorai.004G016400 5.0kb upstream 5.0kb upstream 8732 true Chr04: 1165053-1173784 Gossypium raimondii
Gorai.004G016400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1168785-1173784 Gossypium raimondii
Gorai.004G016400 5.0kb downstream 5.0kb downstream 8732 true Chr04: 1160053-1168784 Gossypium raimondii
Gorai.004G016400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1160053-1165052 Gossypium raimondii
Gorai.004G016400 10.0kb upstream 10.0kb upstream 13732 true Chr04: 1165053-1178784 Gossypium raimondii
Gorai.004G016400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1168785-1178784 Gossypium raimondii
Gorai.004G016400 10.0kb downstream 10.0kb downstream 13732 true Chr04: 1155053-1168784 Gossypium raimondii
Gorai.004G016400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1155053-1165052 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828575 5264 Brassicales-Malvales View MSA
124336609 5266 SBM View MSA
124240236 5268 Malvidae View MSA
124064980 5270 Rosid View MSA
123746425 5271 Pentapetalae View MSA
122797838 5272 Eudicot View MSA
122045189 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121347962 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain