Gene : Gorai.004G016200 G. raimondii v2.1
Defline:  (1 of 5) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  162
Name:  ? Gorai.004G016200 Secondary Identifier:  ? PAC:26773144
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5098 Gossypium raimondii pathologic  
Graimondii PWY-6927 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G016200 0.5kb upstream 0.5kb upstream 2794 true Chr04: 1156238-1159031 Gossypium raimondii
Gorai.004G016200 0.5kb upstream 0.5kb upstream 500 false Chr04: 1158532-1159031 Gossypium raimondii
Gorai.004G016200 0.5kb downstream 0.5kb downstream 2794 true Chr04: 1155738-1158531 Gossypium raimondii
Gorai.004G016200 0.5kb downstream 0.5kb downstream 500 false Chr04: 1155738-1156237 Gossypium raimondii
Gorai.004G016200 1.0kb upstream 1.0kb upstream 3294 true Chr04: 1156238-1159531 Gossypium raimondii
Gorai.004G016200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1158532-1159531 Gossypium raimondii
Gorai.004G016200 1.0kb downstream 1.0kb downstream 3294 true Chr04: 1155238-1158531 Gossypium raimondii
Gorai.004G016200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1155238-1156237 Gossypium raimondii
Gorai.004G016200 2.0kb upstream 2.0kb upstream 4294 true Chr04: 1156238-1160531 Gossypium raimondii
Gorai.004G016200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1158532-1160531 Gossypium raimondii
Gorai.004G016200 2.0kb downstream 2.0kb downstream 4294 true Chr04: 1154238-1158531 Gossypium raimondii
Gorai.004G016200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1154238-1156237 Gossypium raimondii
Gorai.004G016200 5.0kb upstream 5.0kb upstream 7294 true Chr04: 1156238-1163531 Gossypium raimondii
Gorai.004G016200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1158532-1163531 Gossypium raimondii
Gorai.004G016200 5.0kb downstream 5.0kb downstream 7294 true Chr04: 1151238-1158531 Gossypium raimondii
Gorai.004G016200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1151238-1156237 Gossypium raimondii
Gorai.004G016200 10.0kb upstream 10.0kb upstream 12294 true Chr04: 1156238-1168531 Gossypium raimondii
Gorai.004G016200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1158532-1168531 Gossypium raimondii
Gorai.004G016200 10.0kb downstream 10.0kb downstream 12294 true Chr04: 1146238-1158531 Gossypium raimondii
Gorai.004G016200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1146238-1156237 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658632 5273 Angiosperm View MSA
123806188 5264 Brassicales-Malvales Singleton cluster - no MSA
124303114 5266 SBM Singleton cluster - no MSA
124153836 5268 Malvidae Singleton cluster - no MSA
124042776 5270 Rosid View MSA
123612937 5271 Pentapetalae View MSA
122647415 5272 Eudicot View MSA
123429167 5275 Viridiplantae View MSA
120930602 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain