Gene : Gorai.004G039600 G. raimondii v2.1
Defline:  (1 of 3) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  396
Name:  ? Gorai.004G039600 Secondary Identifier:  ? PAC:26775415
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G039600 0.5kb upstream 0.5kb upstream 9151 true Chr04: 3312565-3321715 Gossypium raimondii
Gorai.004G039600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3321216-3321715 Gossypium raimondii
Gorai.004G039600 0.5kb downstream 0.5kb downstream 9151 true Chr04: 3312065-3321215 Gossypium raimondii
Gorai.004G039600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3312065-3312564 Gossypium raimondii
Gorai.004G039600 1.0kb upstream 1.0kb upstream 9651 true Chr04: 3312565-3322215 Gossypium raimondii
Gorai.004G039600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3321216-3322215 Gossypium raimondii
Gorai.004G039600 1.0kb downstream 1.0kb downstream 9651 true Chr04: 3311565-3321215 Gossypium raimondii
Gorai.004G039600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3311565-3312564 Gossypium raimondii
Gorai.004G039600 2.0kb upstream 2.0kb upstream 10651 true Chr04: 3312565-3323215 Gossypium raimondii
Gorai.004G039600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3321216-3323215 Gossypium raimondii
Gorai.004G039600 2.0kb downstream 2.0kb downstream 10651 true Chr04: 3310565-3321215 Gossypium raimondii
Gorai.004G039600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3310565-3312564 Gossypium raimondii
Gorai.004G039600 5.0kb upstream 5.0kb upstream 13651 true Chr04: 3312565-3326215 Gossypium raimondii
Gorai.004G039600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3321216-3326215 Gossypium raimondii
Gorai.004G039600 5.0kb downstream 5.0kb downstream 13651 true Chr04: 3307565-3321215 Gossypium raimondii
Gorai.004G039600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3307565-3312564 Gossypium raimondii
Gorai.004G039600 10.0kb upstream 10.0kb upstream 18651 true Chr04: 3312565-3331215 Gossypium raimondii
Gorai.004G039600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3321216-3331215 Gossypium raimondii
Gorai.004G039600 10.0kb downstream 10.0kb downstream 18651 true Chr04: 3302565-3321215 Gossypium raimondii
Gorai.004G039600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3302565-3312564 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841035 5264 Brassicales-Malvales View MSA
124344060 5266 SBM View MSA
124251962 5268 Malvidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain