Gene : Gorai.004G041700 G. raimondii v2.1
Defline:  (1 of 2) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Genomic Order:  417
Name:  ? Gorai.004G041700 Secondary Identifier:  ? PAC:26776917
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PANTO-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G041700 0.5kb upstream 0.5kb upstream 3810 true Chr04: 3615630-3619439 Gossypium raimondii
Gorai.004G041700 0.5kb upstream 0.5kb upstream 500 false Chr04: 3615630-3616129 Gossypium raimondii
Gorai.004G041700 0.5kb downstream 0.5kb downstream 3810 true Chr04: 3616130-3619939 Gossypium raimondii
Gorai.004G041700 0.5kb downstream 0.5kb downstream 500 false Chr04: 3619440-3619939 Gossypium raimondii
Gorai.004G041700 1.0kb upstream 1.0kb upstream 4310 true Chr04: 3615130-3619439 Gossypium raimondii
Gorai.004G041700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3615130-3616129 Gossypium raimondii
Gorai.004G041700 1.0kb downstream 1.0kb downstream 4310 true Chr04: 3616130-3620439 Gossypium raimondii
Gorai.004G041700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3619440-3620439 Gossypium raimondii
Gorai.004G041700 2.0kb upstream 2.0kb upstream 5310 true Chr04: 3614130-3619439 Gossypium raimondii
Gorai.004G041700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3614130-3616129 Gossypium raimondii
Gorai.004G041700 2.0kb downstream 2.0kb downstream 5310 true Chr04: 3616130-3621439 Gossypium raimondii
Gorai.004G041700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3619440-3621439 Gossypium raimondii
Gorai.004G041700 5.0kb upstream 5.0kb upstream 8310 true Chr04: 3611130-3619439 Gossypium raimondii
Gorai.004G041700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3611130-3616129 Gossypium raimondii
Gorai.004G041700 5.0kb downstream 5.0kb downstream 8310 true Chr04: 3616130-3624439 Gossypium raimondii
Gorai.004G041700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3619440-3624439 Gossypium raimondii
Gorai.004G041700 10.0kb upstream 10.0kb upstream 13310 true Chr04: 3606130-3619439 Gossypium raimondii
Gorai.004G041700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3606130-3616129 Gossypium raimondii
Gorai.004G041700 10.0kb downstream 10.0kb downstream 13310 true Chr04: 3616130-3629439 Gossypium raimondii
Gorai.004G041700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3619440-3629439 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840931 5264 Brassicales-Malvales View MSA
124337427 5266 SBM View MSA
124240313 5268 Malvidae View MSA
124063716 5270 Rosid View MSA
123736873 5271 Pentapetalae View MSA
122793216 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain