Gene : Gorai.004G052700 G. raimondii v2.1
Defline:  (1 of 18) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  527
Name:  ? Gorai.004G052700 Secondary Identifier:  ? PAC:26776856
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5936 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G052700 0.5kb upstream 0.5kb upstream 2695 true Chr04: 4824479-4827173 Gossypium raimondii
Gorai.004G052700 0.5kb upstream 0.5kb upstream 500 false Chr04: 4824479-4824978 Gossypium raimondii
Gorai.004G052700 0.5kb downstream 0.5kb downstream 2695 true Chr04: 4824979-4827673 Gossypium raimondii
Gorai.004G052700 0.5kb downstream 0.5kb downstream 500 false Chr04: 4827174-4827673 Gossypium raimondii
Gorai.004G052700 1.0kb upstream 1.0kb upstream 3195 true Chr04: 4823979-4827173 Gossypium raimondii
Gorai.004G052700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4823979-4824978 Gossypium raimondii
Gorai.004G052700 1.0kb downstream 1.0kb downstream 3195 true Chr04: 4824979-4828173 Gossypium raimondii
Gorai.004G052700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4827174-4828173 Gossypium raimondii
Gorai.004G052700 2.0kb upstream 2.0kb upstream 4195 true Chr04: 4822979-4827173 Gossypium raimondii
Gorai.004G052700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4822979-4824978 Gossypium raimondii
Gorai.004G052700 2.0kb downstream 2.0kb downstream 4195 true Chr04: 4824979-4829173 Gossypium raimondii
Gorai.004G052700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4827174-4829173 Gossypium raimondii
Gorai.004G052700 5.0kb upstream 5.0kb upstream 7195 true Chr04: 4819979-4827173 Gossypium raimondii
Gorai.004G052700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4819979-4824978 Gossypium raimondii
Gorai.004G052700 5.0kb downstream 5.0kb downstream 7195 true Chr04: 4824979-4832173 Gossypium raimondii
Gorai.004G052700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4827174-4832173 Gossypium raimondii
Gorai.004G052700 10.0kb upstream 10.0kb upstream 12195 true Chr04: 4814979-4827173 Gossypium raimondii
Gorai.004G052700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4814979-4824978 Gossypium raimondii
Gorai.004G052700 10.0kb downstream 10.0kb downstream 12195 true Chr04: 4824979-4837173 Gossypium raimondii
Gorai.004G052700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4827174-4837173 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833472 5264 Brassicales-Malvales View MSA
124339455 5266 SBM View MSA
124245005 5268 Malvidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain