Gene : Gorai.004G057500 G. raimondii v2.1
Defline:  (1 of 4) PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED Genomic Order:  575
Name:  ? Gorai.004G057500 Secondary Identifier:  ? PAC:26776538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G057500 0.5kb upstream 0.5kb upstream 4757 true Chr04: 5524072-5528828 Gossypium raimondii
Gorai.004G057500 0.5kb upstream 0.5kb upstream 500 false Chr04: 5524072-5524571 Gossypium raimondii
Gorai.004G057500 0.5kb downstream 0.5kb downstream 4757 true Chr04: 5524572-5529328 Gossypium raimondii
Gorai.004G057500 0.5kb downstream 0.5kb downstream 500 false Chr04: 5528829-5529328 Gossypium raimondii
Gorai.004G057500 1.0kb upstream 1.0kb upstream 5257 true Chr04: 5523572-5528828 Gossypium raimondii
Gorai.004G057500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5523572-5524571 Gossypium raimondii
Gorai.004G057500 1.0kb downstream 1.0kb downstream 5257 true Chr04: 5524572-5529828 Gossypium raimondii
Gorai.004G057500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5528829-5529828 Gossypium raimondii
Gorai.004G057500 2.0kb upstream 2.0kb upstream 6257 true Chr04: 5522572-5528828 Gossypium raimondii
Gorai.004G057500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5522572-5524571 Gossypium raimondii
Gorai.004G057500 2.0kb downstream 2.0kb downstream 6257 true Chr04: 5524572-5530828 Gossypium raimondii
Gorai.004G057500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5528829-5530828 Gossypium raimondii
Gorai.004G057500 5.0kb upstream 5.0kb upstream 9257 true Chr04: 5519572-5528828 Gossypium raimondii
Gorai.004G057500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5519572-5524571 Gossypium raimondii
Gorai.004G057500 5.0kb downstream 5.0kb downstream 9257 true Chr04: 5524572-5533828 Gossypium raimondii
Gorai.004G057500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5528829-5533828 Gossypium raimondii
Gorai.004G057500 10.0kb upstream 10.0kb upstream 14257 true Chr04: 5514572-5528828 Gossypium raimondii
Gorai.004G057500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5514572-5524571 Gossypium raimondii
Gorai.004G057500 10.0kb downstream 10.0kb downstream 14257 true Chr04: 5524572-5538828 Gossypium raimondii
Gorai.004G057500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5528829-5538828 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838577 5264 Brassicales-Malvales View MSA
124349595 5266 SBM View MSA
124246914 5268 Malvidae View MSA
124072128 5270 Rosid View MSA
123746638 5271 Pentapetalae View MSA
122792580 5272 Eudicot View MSA
122047878 5273 Angiosperm View MSA
121349100 5274 Embryophyte View MSA
123426825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain