Gene : Gorai.004G066400 G. raimondii v2.1
Defline:  (1 of 3) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  664
Name:  ? Gorai.004G066400 Secondary Identifier:  ? PAC:26771810
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G066400 0.5kb upstream 0.5kb upstream 3180 true Chr04: 6821339-6824518 Gossypium raimondii
Gorai.004G066400 0.5kb upstream 0.5kb upstream 500 false Chr04: 6821339-6821838 Gossypium raimondii
Gorai.004G066400 0.5kb downstream 0.5kb downstream 3180 true Chr04: 6821839-6825018 Gossypium raimondii
Gorai.004G066400 0.5kb downstream 0.5kb downstream 500 false Chr04: 6824519-6825018 Gossypium raimondii
Gorai.004G066400 1.0kb upstream 1.0kb upstream 3680 true Chr04: 6820839-6824518 Gossypium raimondii
Gorai.004G066400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6820839-6821838 Gossypium raimondii
Gorai.004G066400 1.0kb downstream 1.0kb downstream 3680 true Chr04: 6821839-6825518 Gossypium raimondii
Gorai.004G066400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6824519-6825518 Gossypium raimondii
Gorai.004G066400 2.0kb upstream 2.0kb upstream 4680 true Chr04: 6819839-6824518 Gossypium raimondii
Gorai.004G066400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6819839-6821838 Gossypium raimondii
Gorai.004G066400 2.0kb downstream 2.0kb downstream 4680 true Chr04: 6821839-6826518 Gossypium raimondii
Gorai.004G066400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6824519-6826518 Gossypium raimondii
Gorai.004G066400 5.0kb upstream 5.0kb upstream 7680 true Chr04: 6816839-6824518 Gossypium raimondii
Gorai.004G066400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6816839-6821838 Gossypium raimondii
Gorai.004G066400 5.0kb downstream 5.0kb downstream 7680 true Chr04: 6821839-6829518 Gossypium raimondii
Gorai.004G066400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6824519-6829518 Gossypium raimondii
Gorai.004G066400 10.0kb upstream 10.0kb upstream 12680 true Chr04: 6811839-6824518 Gossypium raimondii
Gorai.004G066400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6811839-6821838 Gossypium raimondii
Gorai.004G066400 10.0kb downstream 10.0kb downstream 12680 true Chr04: 6821839-6834518 Gossypium raimondii
Gorai.004G066400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6824519-6834518 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839826 5264 Brassicales-Malvales View MSA
124338536 5266 SBM View MSA
124237828 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain