Gene : Gorai.004G105600 G. raimondii v2.1
Defline:  (1 of 1) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  1056
Name:  ? Gorai.004G105600 Secondary Identifier:  ? PAC:26774245
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ANAEROFRUCAT-PWY Gossypium raimondii pathologic  
Graimondii ANAGLYCOLYSIS-PWY Gossypium raimondii pathologic  
Graimondii GLUCOSE1PMETAB-PWY Gossypium raimondii pathologic  
Graimondii PWY-621 Gossypium raimondii pathologic  
Graimondii PWY-7238 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G105600 0.5kb upstream 0.5kb upstream 6091 true Chr04: 21478110-21484200 Gossypium raimondii
Gorai.004G105600 0.5kb upstream 0.5kb upstream 500 false Chr04: 21483701-21484200 Gossypium raimondii
Gorai.004G105600 0.5kb downstream 0.5kb downstream 6091 true Chr04: 21477610-21483700 Gossypium raimondii
Gorai.004G105600 0.5kb downstream 0.5kb downstream 500 false Chr04: 21477610-21478109 Gossypium raimondii
Gorai.004G105600 1.0kb upstream 1.0kb upstream 6591 true Chr04: 21478110-21484700 Gossypium raimondii
Gorai.004G105600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21483701-21484700 Gossypium raimondii
Gorai.004G105600 1.0kb downstream 1.0kb downstream 6591 true Chr04: 21477110-21483700 Gossypium raimondii
Gorai.004G105600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21477110-21478109 Gossypium raimondii
Gorai.004G105600 2.0kb upstream 2.0kb upstream 7591 true Chr04: 21478110-21485700 Gossypium raimondii
Gorai.004G105600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21483701-21485700 Gossypium raimondii
Gorai.004G105600 2.0kb downstream 2.0kb downstream 7591 true Chr04: 21476110-21483700 Gossypium raimondii
Gorai.004G105600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21476110-21478109 Gossypium raimondii
Gorai.004G105600 5.0kb upstream 5.0kb upstream 10591 true Chr04: 21478110-21488700 Gossypium raimondii
Gorai.004G105600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21483701-21488700 Gossypium raimondii
Gorai.004G105600 5.0kb downstream 5.0kb downstream 10591 true Chr04: 21473110-21483700 Gossypium raimondii
Gorai.004G105600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21473110-21478109 Gossypium raimondii
Gorai.004G105600 10.0kb upstream 10.0kb upstream 15591 true Chr04: 21478110-21493700 Gossypium raimondii
Gorai.004G105600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21483701-21493700 Gossypium raimondii
Gorai.004G105600 10.0kb downstream 10.0kb downstream 15591 true Chr04: 21468110-21483700 Gossypium raimondii
Gorai.004G105600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21468110-21478109 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830240 5264 Brassicales-Malvales View MSA
124346939 5266 SBM View MSA
124240736 5268 Malvidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain