Gene : Gorai.004G111300 G. raimondii v2.1
Defline:  (1 of 2) KOG1353 - F0F1-type ATP synthase, alpha subunit Genomic Order:  1113
Name:  ? Gorai.004G111300 Secondary Identifier:  ? PAC:26776741
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G111300 0.5kb upstream 0.5kb upstream 2848 true Chr04: 24674685-24677532 Gossypium raimondii
Gorai.004G111300 0.5kb upstream 0.5kb upstream 500 false Chr04: 24674685-24675184 Gossypium raimondii
Gorai.004G111300 0.5kb downstream 0.5kb downstream 2848 true Chr04: 24675185-24678032 Gossypium raimondii
Gorai.004G111300 0.5kb downstream 0.5kb downstream 500 false Chr04: 24677533-24678032 Gossypium raimondii
Gorai.004G111300 1.0kb upstream 1.0kb upstream 3348 true Chr04: 24674185-24677532 Gossypium raimondii
Gorai.004G111300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 24674185-24675184 Gossypium raimondii
Gorai.004G111300 1.0kb downstream 1.0kb downstream 3348 true Chr04: 24675185-24678532 Gossypium raimondii
Gorai.004G111300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 24677533-24678532 Gossypium raimondii
Gorai.004G111300 2.0kb upstream 2.0kb upstream 4348 true Chr04: 24673185-24677532 Gossypium raimondii
Gorai.004G111300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 24673185-24675184 Gossypium raimondii
Gorai.004G111300 2.0kb downstream 2.0kb downstream 4348 true Chr04: 24675185-24679532 Gossypium raimondii
Gorai.004G111300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 24677533-24679532 Gossypium raimondii
Gorai.004G111300 5.0kb upstream 5.0kb upstream 7348 true Chr04: 24670185-24677532 Gossypium raimondii
Gorai.004G111300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 24670185-24675184 Gossypium raimondii
Gorai.004G111300 5.0kb downstream 5.0kb downstream 7348 true Chr04: 24675185-24682532 Gossypium raimondii
Gorai.004G111300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 24677533-24682532 Gossypium raimondii
Gorai.004G111300 10.0kb upstream 10.0kb upstream 12348 true Chr04: 24665185-24677532 Gossypium raimondii
Gorai.004G111300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 24665185-24675184 Gossypium raimondii
Gorai.004G111300 10.0kb downstream 10.0kb downstream 12348 true Chr04: 24675185-24687532 Gossypium raimondii
Gorai.004G111300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 24677533-24687532 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837231 5264 Brassicales-Malvales View MSA
124322265 5266 SBM View MSA
124253426 5268 Malvidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain