Gene : Gorai.004G123800 G. raimondii v2.1

Defline:  (1 of 146) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  1238
Name:  ? Gorai.004G123800 Secondary Identifier:  ? PAC:26773942

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G123800 0.5kb upstream 0.5kb upstream 1125 true Chr04: 32179016-32180140 Gossypium raimondii
Gorai.004G123800 0.5kb upstream 0.5kb upstream 500 false Chr04: 32179016-32179515 Gossypium raimondii
Gorai.004G123800 0.5kb downstream 0.5kb downstream 1125 true Chr04: 32179516-32180640 Gossypium raimondii
Gorai.004G123800 0.5kb downstream 0.5kb downstream 500 false Chr04: 32180141-32180640 Gossypium raimondii
Gorai.004G123800 1.0kb upstream 1.0kb upstream 1625 true Chr04: 32178516-32180140 Gossypium raimondii
Gorai.004G123800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 32178516-32179515 Gossypium raimondii
Gorai.004G123800 1.0kb downstream 1.0kb downstream 1625 true Chr04: 32179516-32181140 Gossypium raimondii
Gorai.004G123800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 32180141-32181140 Gossypium raimondii
Gorai.004G123800 2.0kb upstream 2.0kb upstream 2625 true Chr04: 32177516-32180140 Gossypium raimondii
Gorai.004G123800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 32177516-32179515 Gossypium raimondii
Gorai.004G123800 2.0kb downstream 2.0kb downstream 2625 true Chr04: 32179516-32182140 Gossypium raimondii
Gorai.004G123800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 32180141-32182140 Gossypium raimondii
Gorai.004G123800 5.0kb upstream 5.0kb upstream 5625 true Chr04: 32174516-32180140 Gossypium raimondii
Gorai.004G123800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 32174516-32179515 Gossypium raimondii
Gorai.004G123800 5.0kb downstream 5.0kb downstream 5625 true Chr04: 32179516-32185140 Gossypium raimondii
Gorai.004G123800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 32180141-32185140 Gossypium raimondii
Gorai.004G123800 10.0kb upstream 10.0kb upstream 10625 true Chr04: 32169516-32180140 Gossypium raimondii
Gorai.004G123800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 32169516-32179515 Gossypium raimondii
Gorai.004G123800 10.0kb downstream 10.0kb downstream 10625 true Chr04: 32179516-32190140 Gossypium raimondii
Gorai.004G123800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 32180141-32190140 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838216 5264 Brassicales-Malvales View MSA
124322416 5266 SBM View MSA
124250911 5268 Malvidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain