Gene : Gorai.004G127800 G. raimondii v2.1
Defline:  (1 of 4) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  1278
Name:  ? Gorai.004G127800 Secondary Identifier:  ? PAC:26772067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G127800 0.5kb upstream 0.5kb upstream 8085 true Chr04: 33637549-33645633 Gossypium raimondii
Gorai.004G127800 0.5kb upstream 0.5kb upstream 500 false Chr04: 33645134-33645633 Gossypium raimondii
Gorai.004G127800 0.5kb downstream 0.5kb downstream 8085 true Chr04: 33637049-33645133 Gossypium raimondii
Gorai.004G127800 0.5kb downstream 0.5kb downstream 500 false Chr04: 33637049-33637548 Gossypium raimondii
Gorai.004G127800 1.0kb upstream 1.0kb upstream 8585 true Chr04: 33637549-33646133 Gossypium raimondii
Gorai.004G127800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 33645134-33646133 Gossypium raimondii
Gorai.004G127800 1.0kb downstream 1.0kb downstream 8585 true Chr04: 33636549-33645133 Gossypium raimondii
Gorai.004G127800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 33636549-33637548 Gossypium raimondii
Gorai.004G127800 2.0kb upstream 2.0kb upstream 9585 true Chr04: 33637549-33647133 Gossypium raimondii
Gorai.004G127800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 33645134-33647133 Gossypium raimondii
Gorai.004G127800 2.0kb downstream 2.0kb downstream 9585 true Chr04: 33635549-33645133 Gossypium raimondii
Gorai.004G127800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 33635549-33637548 Gossypium raimondii
Gorai.004G127800 5.0kb upstream 5.0kb upstream 12585 true Chr04: 33637549-33650133 Gossypium raimondii
Gorai.004G127800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 33645134-33650133 Gossypium raimondii
Gorai.004G127800 5.0kb downstream 5.0kb downstream 12585 true Chr04: 33632549-33645133 Gossypium raimondii
Gorai.004G127800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 33632549-33637548 Gossypium raimondii
Gorai.004G127800 10.0kb upstream 10.0kb upstream 17585 true Chr04: 33637549-33655133 Gossypium raimondii
Gorai.004G127800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 33645134-33655133 Gossypium raimondii
Gorai.004G127800 10.0kb downstream 10.0kb downstream 17585 true Chr04: 33627549-33645133 Gossypium raimondii
Gorai.004G127800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 33627549-33637548 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123806021 5264 Brassicales-Malvales Singleton cluster - no MSA
124302958 5266 SBM Singleton cluster - no MSA
124253768 5268 Malvidae View MSA
124061864 5270 Rosid View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain