Gene : Gorai.004G159600 G. raimondii v2.1
Defline:  (1 of 2) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  1596
Name:  ? Gorai.004G159600 Secondary Identifier:  ? PAC:26772384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7039 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G159600 0.5kb upstream 0.5kb upstream 4286 true Chr04: 44916358-44920643 Gossypium raimondii
Gorai.004G159600 0.5kb upstream 0.5kb upstream 500 false Chr04: 44920144-44920643 Gossypium raimondii
Gorai.004G159600 0.5kb downstream 0.5kb downstream 4286 true Chr04: 44915858-44920143 Gossypium raimondii
Gorai.004G159600 0.5kb downstream 0.5kb downstream 500 false Chr04: 44915858-44916357 Gossypium raimondii
Gorai.004G159600 1.0kb upstream 1.0kb upstream 4786 true Chr04: 44916358-44921143 Gossypium raimondii
Gorai.004G159600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44920144-44921143 Gossypium raimondii
Gorai.004G159600 1.0kb downstream 1.0kb downstream 4786 true Chr04: 44915358-44920143 Gossypium raimondii
Gorai.004G159600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44915358-44916357 Gossypium raimondii
Gorai.004G159600 2.0kb upstream 2.0kb upstream 5786 true Chr04: 44916358-44922143 Gossypium raimondii
Gorai.004G159600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44920144-44922143 Gossypium raimondii
Gorai.004G159600 2.0kb downstream 2.0kb downstream 5786 true Chr04: 44914358-44920143 Gossypium raimondii
Gorai.004G159600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44914358-44916357 Gossypium raimondii
Gorai.004G159600 5.0kb upstream 5.0kb upstream 8786 true Chr04: 44916358-44925143 Gossypium raimondii
Gorai.004G159600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44920144-44925143 Gossypium raimondii
Gorai.004G159600 5.0kb downstream 5.0kb downstream 8786 true Chr04: 44911358-44920143 Gossypium raimondii
Gorai.004G159600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44911358-44916357 Gossypium raimondii
Gorai.004G159600 10.0kb upstream 10.0kb upstream 13786 true Chr04: 44916358-44930143 Gossypium raimondii
Gorai.004G159600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44920144-44930143 Gossypium raimondii
Gorai.004G159600 10.0kb downstream 10.0kb downstream 13786 true Chr04: 44906358-44920143 Gossypium raimondii
Gorai.004G159600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44906358-44916357 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830792 5264 Brassicales-Malvales View MSA
124343149 5266 SBM View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain