Gene : Gorai.004G165200 G. raimondii v2.1
Defline:  (1 of 2) PTHR12866:SF2 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 Genomic Order:  1652
Name:  ? Gorai.004G165200 Secondary Identifier:  ? PAC:26773525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G165200 0.5kb upstream 0.5kb upstream 3973 true Chr04: 45945826-45949798 Gossypium raimondii
Gorai.004G165200 0.5kb upstream 0.5kb upstream 500 false Chr04: 45949299-45949798 Gossypium raimondii
Gorai.004G165200 0.5kb downstream 0.5kb downstream 3973 true Chr04: 45945326-45949298 Gossypium raimondii
Gorai.004G165200 0.5kb downstream 0.5kb downstream 500 false Chr04: 45945326-45945825 Gossypium raimondii
Gorai.004G165200 1.0kb upstream 1.0kb upstream 4473 true Chr04: 45945826-45950298 Gossypium raimondii
Gorai.004G165200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45949299-45950298 Gossypium raimondii
Gorai.004G165200 1.0kb downstream 1.0kb downstream 4473 true Chr04: 45944826-45949298 Gossypium raimondii
Gorai.004G165200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45944826-45945825 Gossypium raimondii
Gorai.004G165200 2.0kb upstream 2.0kb upstream 5473 true Chr04: 45945826-45951298 Gossypium raimondii
Gorai.004G165200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45949299-45951298 Gossypium raimondii
Gorai.004G165200 2.0kb downstream 2.0kb downstream 5473 true Chr04: 45943826-45949298 Gossypium raimondii
Gorai.004G165200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45943826-45945825 Gossypium raimondii
Gorai.004G165200 5.0kb upstream 5.0kb upstream 8473 true Chr04: 45945826-45954298 Gossypium raimondii
Gorai.004G165200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45949299-45954298 Gossypium raimondii
Gorai.004G165200 5.0kb downstream 5.0kb downstream 8473 true Chr04: 45940826-45949298 Gossypium raimondii
Gorai.004G165200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45940826-45945825 Gossypium raimondii
Gorai.004G165200 10.0kb upstream 10.0kb upstream 13473 true Chr04: 45945826-45959298 Gossypium raimondii
Gorai.004G165200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45949299-45959298 Gossypium raimondii
Gorai.004G165200 10.0kb downstream 10.0kb downstream 13473 true Chr04: 45935826-45949298 Gossypium raimondii
Gorai.004G165200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45935826-45945825 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831045 5264 Brassicales-Malvales View MSA
124350961 5266 SBM View MSA
124242414 5268 Malvidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain