Gene : Gorai.004G165000 G. raimondii v2.1
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  1650
Name:  ? Gorai.004G165000 Secondary Identifier:  ? PAC:26772085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G165000 0.5kb upstream 0.5kb upstream 1877 true Chr04: 45901418-45903294 Gossypium raimondii
Gorai.004G165000 0.5kb upstream 0.5kb upstream 500 false Chr04: 45901418-45901917 Gossypium raimondii
Gorai.004G165000 0.5kb downstream 0.5kb downstream 1877 true Chr04: 45901918-45903794 Gossypium raimondii
Gorai.004G165000 0.5kb downstream 0.5kb downstream 500 false Chr04: 45903295-45903794 Gossypium raimondii
Gorai.004G165000 1.0kb upstream 1.0kb upstream 2377 true Chr04: 45900918-45903294 Gossypium raimondii
Gorai.004G165000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45900918-45901917 Gossypium raimondii
Gorai.004G165000 1.0kb downstream 1.0kb downstream 2377 true Chr04: 45901918-45904294 Gossypium raimondii
Gorai.004G165000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45903295-45904294 Gossypium raimondii
Gorai.004G165000 2.0kb upstream 2.0kb upstream 3377 true Chr04: 45899918-45903294 Gossypium raimondii
Gorai.004G165000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45899918-45901917 Gossypium raimondii
Gorai.004G165000 2.0kb downstream 2.0kb downstream 3377 true Chr04: 45901918-45905294 Gossypium raimondii
Gorai.004G165000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45903295-45905294 Gossypium raimondii
Gorai.004G165000 5.0kb upstream 5.0kb upstream 6377 true Chr04: 45896918-45903294 Gossypium raimondii
Gorai.004G165000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45896918-45901917 Gossypium raimondii
Gorai.004G165000 5.0kb downstream 5.0kb downstream 6377 true Chr04: 45901918-45908294 Gossypium raimondii
Gorai.004G165000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45903295-45908294 Gossypium raimondii
Gorai.004G165000 10.0kb upstream 10.0kb upstream 11377 true Chr04: 45891918-45903294 Gossypium raimondii
Gorai.004G165000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45891918-45901917 Gossypium raimondii
Gorai.004G165000 10.0kb downstream 10.0kb downstream 11377 true Chr04: 45901918-45913294 Gossypium raimondii
Gorai.004G165000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45903295-45913294 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828982 5264 Brassicales-Malvales View MSA
124336806 5266 SBM View MSA
124239117 5268 Malvidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain