Gene : Gorai.004G171800 G. raimondii v2.1
Defline:  (1 of 1) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  1718
Name:  ? Gorai.004G171800 Secondary Identifier:  ? PAC:26777828
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G171800 0.5kb upstream 0.5kb upstream 1396 true Chr04: 47223623-47225018 Gossypium raimondii
Gorai.004G171800 0.5kb upstream 0.5kb upstream 500 false Chr04: 47223623-47224122 Gossypium raimondii
Gorai.004G171800 0.5kb downstream 0.5kb downstream 1396 true Chr04: 47224123-47225518 Gossypium raimondii
Gorai.004G171800 0.5kb downstream 0.5kb downstream 500 false Chr04: 47225019-47225518 Gossypium raimondii
Gorai.004G171800 1.0kb upstream 1.0kb upstream 1896 true Chr04: 47223123-47225018 Gossypium raimondii
Gorai.004G171800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47223123-47224122 Gossypium raimondii
Gorai.004G171800 1.0kb downstream 1.0kb downstream 1896 true Chr04: 47224123-47226018 Gossypium raimondii
Gorai.004G171800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47225019-47226018 Gossypium raimondii
Gorai.004G171800 2.0kb upstream 2.0kb upstream 2896 true Chr04: 47222123-47225018 Gossypium raimondii
Gorai.004G171800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47222123-47224122 Gossypium raimondii
Gorai.004G171800 2.0kb downstream 2.0kb downstream 2896 true Chr04: 47224123-47227018 Gossypium raimondii
Gorai.004G171800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47225019-47227018 Gossypium raimondii
Gorai.004G171800 5.0kb upstream 5.0kb upstream 5896 true Chr04: 47219123-47225018 Gossypium raimondii
Gorai.004G171800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47219123-47224122 Gossypium raimondii
Gorai.004G171800 5.0kb downstream 5.0kb downstream 5896 true Chr04: 47224123-47230018 Gossypium raimondii
Gorai.004G171800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47225019-47230018 Gossypium raimondii
Gorai.004G171800 10.0kb upstream 10.0kb upstream 10896 true Chr04: 47214123-47225018 Gossypium raimondii
Gorai.004G171800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47214123-47224122 Gossypium raimondii
Gorai.004G171800 10.0kb downstream 10.0kb downstream 10896 true Chr04: 47224123-47235018 Gossypium raimondii
Gorai.004G171800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47225019-47235018 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840325 5264 Brassicales-Malvales View MSA
124349006 5266 SBM View MSA
124249733 5268 Malvidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain