Gene : Gorai.004G174800 G. raimondii v2.1
Defline:  (1 of 1) PTHR13483:SF3 - BOX C/D SNORNA PROTEIN 1 Genomic Order:  1748
Name:  ? Gorai.004G174800 Secondary Identifier:  ? PAC:26776691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G174800 0.5kb upstream 0.5kb upstream 3212 true Chr04: 47719188-47722399 Gossypium raimondii
Gorai.004G174800 0.5kb upstream 0.5kb upstream 500 false Chr04: 47721900-47722399 Gossypium raimondii
Gorai.004G174800 0.5kb downstream 0.5kb downstream 3212 true Chr04: 47718688-47721899 Gossypium raimondii
Gorai.004G174800 0.5kb downstream 0.5kb downstream 500 false Chr04: 47718688-47719187 Gossypium raimondii
Gorai.004G174800 1.0kb upstream 1.0kb upstream 3712 true Chr04: 47719188-47722899 Gossypium raimondii
Gorai.004G174800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47721900-47722899 Gossypium raimondii
Gorai.004G174800 1.0kb downstream 1.0kb downstream 3712 true Chr04: 47718188-47721899 Gossypium raimondii
Gorai.004G174800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47718188-47719187 Gossypium raimondii
Gorai.004G174800 2.0kb upstream 2.0kb upstream 4712 true Chr04: 47719188-47723899 Gossypium raimondii
Gorai.004G174800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47721900-47723899 Gossypium raimondii
Gorai.004G174800 2.0kb downstream 2.0kb downstream 4712 true Chr04: 47717188-47721899 Gossypium raimondii
Gorai.004G174800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47717188-47719187 Gossypium raimondii
Gorai.004G174800 5.0kb upstream 5.0kb upstream 7712 true Chr04: 47719188-47726899 Gossypium raimondii
Gorai.004G174800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47721900-47726899 Gossypium raimondii
Gorai.004G174800 5.0kb downstream 5.0kb downstream 7712 true Chr04: 47714188-47721899 Gossypium raimondii
Gorai.004G174800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47714188-47719187 Gossypium raimondii
Gorai.004G174800 10.0kb upstream 10.0kb upstream 12712 true Chr04: 47719188-47731899 Gossypium raimondii
Gorai.004G174800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47721900-47731899 Gossypium raimondii
Gorai.004G174800 10.0kb downstream 10.0kb downstream 12712 true Chr04: 47709188-47721899 Gossypium raimondii
Gorai.004G174800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47709188-47719187 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832207 5264 Brassicales-Malvales View MSA
124343266 5266 SBM View MSA
124249775 5268 Malvidae View MSA
124062836 5270 Rosid View MSA
123736967 5271 Pentapetalae View MSA
122789641 5272 Eudicot View MSA
122043413 5273 Angiosperm View MSA
121347000 5274 Embryophyte View MSA
123426353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain