Gene : Gorai.004G177200 G. raimondii v2.1
Defline:  (1 of 2) PTHR24286:SF10 - ABSCISIC ACID 8'-HYDROXYLASE 1-RELATED Genomic Order:  1772
Name:  ? Gorai.004G177200 Secondary Identifier:  ? PAC:26774033
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5271 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G177200 0.5kb upstream 0.5kb upstream 3112 true Chr04: 48354337-48357448 Gossypium raimondii
Gorai.004G177200 0.5kb upstream 0.5kb upstream 500 false Chr04: 48356949-48357448 Gossypium raimondii
Gorai.004G177200 0.5kb downstream 0.5kb downstream 3112 true Chr04: 48353837-48356948 Gossypium raimondii
Gorai.004G177200 0.5kb downstream 0.5kb downstream 500 false Chr04: 48353837-48354336 Gossypium raimondii
Gorai.004G177200 1.0kb upstream 1.0kb upstream 3612 true Chr04: 48354337-48357948 Gossypium raimondii
Gorai.004G177200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48356949-48357948 Gossypium raimondii
Gorai.004G177200 1.0kb downstream 1.0kb downstream 3612 true Chr04: 48353337-48356948 Gossypium raimondii
Gorai.004G177200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48353337-48354336 Gossypium raimondii
Gorai.004G177200 2.0kb upstream 2.0kb upstream 4612 true Chr04: 48354337-48358948 Gossypium raimondii
Gorai.004G177200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48356949-48358948 Gossypium raimondii
Gorai.004G177200 2.0kb downstream 2.0kb downstream 4612 true Chr04: 48352337-48356948 Gossypium raimondii
Gorai.004G177200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48352337-48354336 Gossypium raimondii
Gorai.004G177200 5.0kb upstream 5.0kb upstream 7612 true Chr04: 48354337-48361948 Gossypium raimondii
Gorai.004G177200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48356949-48361948 Gossypium raimondii
Gorai.004G177200 5.0kb downstream 5.0kb downstream 7612 true Chr04: 48349337-48356948 Gossypium raimondii
Gorai.004G177200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48349337-48354336 Gossypium raimondii
Gorai.004G177200 10.0kb upstream 10.0kb upstream 12612 true Chr04: 48354337-48366948 Gossypium raimondii
Gorai.004G177200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48356949-48366948 Gossypium raimondii
Gorai.004G177200 10.0kb downstream 10.0kb downstream 12612 true Chr04: 48344337-48356948 Gossypium raimondii
Gorai.004G177200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48344337-48354336 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839116 5264 Brassicales-Malvales View MSA
124341154 5266 SBM View MSA
124251238 5268 Malvidae View MSA
124067549 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain