Gene : Gorai.004G211500 G. raimondii v2.1
Defline:  (1 of 2) PTHR31500:SF9 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2115
Name:  ? Gorai.004G211500 Secondary Identifier:  ? PAC:26774839
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii DETOX1-PWY Gossypium raimondii pathologic  
Graimondii DETOX1-PWY-1 Gossypium raimondii pathologic  
Graimondii PWY-6854 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G211500 0.5kb upstream 0.5kb upstream 4267 true Chr04: 54421071-54425337 Gossypium raimondii
Gorai.004G211500 0.5kb upstream 0.5kb upstream 500 false Chr04: 54424838-54425337 Gossypium raimondii
Gorai.004G211500 0.5kb downstream 0.5kb downstream 4267 true Chr04: 54420571-54424837 Gossypium raimondii
Gorai.004G211500 0.5kb downstream 0.5kb downstream 500 false Chr04: 54420571-54421070 Gossypium raimondii
Gorai.004G211500 1.0kb upstream 1.0kb upstream 4767 true Chr04: 54421071-54425837 Gossypium raimondii
Gorai.004G211500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54424838-54425837 Gossypium raimondii
Gorai.004G211500 1.0kb downstream 1.0kb downstream 4767 true Chr04: 54420071-54424837 Gossypium raimondii
Gorai.004G211500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54420071-54421070 Gossypium raimondii
Gorai.004G211500 2.0kb upstream 2.0kb upstream 5767 true Chr04: 54421071-54426837 Gossypium raimondii
Gorai.004G211500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54424838-54426837 Gossypium raimondii
Gorai.004G211500 2.0kb downstream 2.0kb downstream 5767 true Chr04: 54419071-54424837 Gossypium raimondii
Gorai.004G211500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54419071-54421070 Gossypium raimondii
Gorai.004G211500 5.0kb upstream 5.0kb upstream 8767 true Chr04: 54421071-54429837 Gossypium raimondii
Gorai.004G211500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54424838-54429837 Gossypium raimondii
Gorai.004G211500 5.0kb downstream 5.0kb downstream 8767 true Chr04: 54416071-54424837 Gossypium raimondii
Gorai.004G211500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54416071-54421070 Gossypium raimondii
Gorai.004G211500 10.0kb upstream 10.0kb upstream 13767 true Chr04: 54421071-54434837 Gossypium raimondii
Gorai.004G211500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54424838-54434837 Gossypium raimondii
Gorai.004G211500 10.0kb downstream 10.0kb downstream 13767 true Chr04: 54411071-54424837 Gossypium raimondii
Gorai.004G211500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54411071-54421070 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
123840437 5264 Brassicales-Malvales View MSA
124346874 5266 SBM View MSA
124247975 5268 Malvidae View MSA
124069510 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain