Gene : Gorai.004G210000 G. raimondii v2.1
Defline:  (1 of 1) KOG0978//KOG4593//KOG4809 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 // Rab6 GTPase-interacting protein involved in endosome-to-TGN transport Genomic Order:  2100
Name:  ? Gorai.004G210000 Secondary Identifier:  ? PAC:26775060
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G210000 0.5kb upstream 0.5kb upstream 5637 true Chr04: 54238213-54243849 Gossypium raimondii
Gorai.004G210000 0.5kb upstream 0.5kb upstream 500 false Chr04: 54238213-54238712 Gossypium raimondii
Gorai.004G210000 0.5kb downstream 0.5kb downstream 5637 true Chr04: 54238713-54244349 Gossypium raimondii
Gorai.004G210000 0.5kb downstream 0.5kb downstream 500 false Chr04: 54243850-54244349 Gossypium raimondii
Gorai.004G210000 1.0kb upstream 1.0kb upstream 6137 true Chr04: 54237713-54243849 Gossypium raimondii
Gorai.004G210000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54237713-54238712 Gossypium raimondii
Gorai.004G210000 1.0kb downstream 1.0kb downstream 6137 true Chr04: 54238713-54244849 Gossypium raimondii
Gorai.004G210000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54243850-54244849 Gossypium raimondii
Gorai.004G210000 2.0kb upstream 2.0kb upstream 7137 true Chr04: 54236713-54243849 Gossypium raimondii
Gorai.004G210000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54236713-54238712 Gossypium raimondii
Gorai.004G210000 2.0kb downstream 2.0kb downstream 7137 true Chr04: 54238713-54245849 Gossypium raimondii
Gorai.004G210000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54243850-54245849 Gossypium raimondii
Gorai.004G210000 5.0kb upstream 5.0kb upstream 10137 true Chr04: 54233713-54243849 Gossypium raimondii
Gorai.004G210000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54233713-54238712 Gossypium raimondii
Gorai.004G210000 5.0kb downstream 5.0kb downstream 10137 true Chr04: 54238713-54248849 Gossypium raimondii
Gorai.004G210000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54243850-54248849 Gossypium raimondii
Gorai.004G210000 10.0kb upstream 10.0kb upstream 15137 true Chr04: 54228713-54243849 Gossypium raimondii
Gorai.004G210000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54228713-54238712 Gossypium raimondii
Gorai.004G210000 10.0kb downstream 10.0kb downstream 15137 true Chr04: 54238713-54253849 Gossypium raimondii
Gorai.004G210000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54243850-54253849 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
123836125 5264 Brassicales-Malvales View MSA
124351344 5266 SBM View MSA
124247012 5268 Malvidae View MSA
124066145 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain