Gene : Gorai.004G215500 G. raimondii v2.1
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  2155
Name:  ? Gorai.004G215500 Secondary Identifier:  ? PAC:26772843
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii DETOX1-PWY-1 Gossypium raimondii pathologic  
Graimondii PWY-4081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G215500 0.5kb upstream 0.5kb upstream 3081 true Chr04: 54843892-54846972 Gossypium raimondii
Gorai.004G215500 0.5kb upstream 0.5kb upstream 500 false Chr04: 54843892-54844391 Gossypium raimondii
Gorai.004G215500 0.5kb downstream 0.5kb downstream 3081 true Chr04: 54844392-54847472 Gossypium raimondii
Gorai.004G215500 0.5kb downstream 0.5kb downstream 500 false Chr04: 54846973-54847472 Gossypium raimondii
Gorai.004G215500 1.0kb upstream 1.0kb upstream 3581 true Chr04: 54843392-54846972 Gossypium raimondii
Gorai.004G215500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54843392-54844391 Gossypium raimondii
Gorai.004G215500 1.0kb downstream 1.0kb downstream 3581 true Chr04: 54844392-54847972 Gossypium raimondii
Gorai.004G215500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54846973-54847972 Gossypium raimondii
Gorai.004G215500 2.0kb upstream 2.0kb upstream 4581 true Chr04: 54842392-54846972 Gossypium raimondii
Gorai.004G215500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54842392-54844391 Gossypium raimondii
Gorai.004G215500 2.0kb downstream 2.0kb downstream 4581 true Chr04: 54844392-54848972 Gossypium raimondii
Gorai.004G215500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54846973-54848972 Gossypium raimondii
Gorai.004G215500 5.0kb upstream 5.0kb upstream 7581 true Chr04: 54839392-54846972 Gossypium raimondii
Gorai.004G215500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54839392-54844391 Gossypium raimondii
Gorai.004G215500 5.0kb downstream 5.0kb downstream 7581 true Chr04: 54844392-54851972 Gossypium raimondii
Gorai.004G215500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54846973-54851972 Gossypium raimondii
Gorai.004G215500 10.0kb upstream 10.0kb upstream 12581 true Chr04: 54834392-54846972 Gossypium raimondii
Gorai.004G215500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54834392-54844391 Gossypium raimondii
Gorai.004G215500 10.0kb downstream 10.0kb downstream 12581 true Chr04: 54844392-54856972 Gossypium raimondii
Gorai.004G215500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54846973-54856972 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
123806146 5264 Brassicales-Malvales Singleton cluster - no MSA
124303075 5266 SBM Singleton cluster - no MSA
124253459 5268 Malvidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain