Gene : Gorai.004G218600 G. raimondii v2.1
Defline:  (1 of 3) PTHR13861 - VACUOLAR ATP SYNTHASE SUBUNIT F Genomic Order:  2186
Name:  ? Gorai.004G218600 Secondary Identifier:  ? PAC:26777316
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G218600 0.5kb upstream 0.5kb upstream 4523 true Chr04: 55228103-55232625 Gossypium raimondii
Gorai.004G218600 0.5kb upstream 0.5kb upstream 500 false Chr04: 55228103-55228602 Gossypium raimondii
Gorai.004G218600 0.5kb downstream 0.5kb downstream 4523 true Chr04: 55228603-55233125 Gossypium raimondii
Gorai.004G218600 0.5kb downstream 0.5kb downstream 500 false Chr04: 55232626-55233125 Gossypium raimondii
Gorai.004G218600 1.0kb upstream 1.0kb upstream 5023 true Chr04: 55227603-55232625 Gossypium raimondii
Gorai.004G218600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55227603-55228602 Gossypium raimondii
Gorai.004G218600 1.0kb downstream 1.0kb downstream 5023 true Chr04: 55228603-55233625 Gossypium raimondii
Gorai.004G218600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55232626-55233625 Gossypium raimondii
Gorai.004G218600 2.0kb upstream 2.0kb upstream 6023 true Chr04: 55226603-55232625 Gossypium raimondii
Gorai.004G218600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55226603-55228602 Gossypium raimondii
Gorai.004G218600 2.0kb downstream 2.0kb downstream 6023 true Chr04: 55228603-55234625 Gossypium raimondii
Gorai.004G218600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55232626-55234625 Gossypium raimondii
Gorai.004G218600 5.0kb upstream 5.0kb upstream 9023 true Chr04: 55223603-55232625 Gossypium raimondii
Gorai.004G218600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55223603-55228602 Gossypium raimondii
Gorai.004G218600 5.0kb downstream 5.0kb downstream 9023 true Chr04: 55228603-55237625 Gossypium raimondii
Gorai.004G218600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55232626-55237625 Gossypium raimondii
Gorai.004G218600 10.0kb upstream 10.0kb upstream 14023 true Chr04: 55218603-55232625 Gossypium raimondii
Gorai.004G218600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55218603-55228602 Gossypium raimondii
Gorai.004G218600 10.0kb downstream 10.0kb downstream 14023 true Chr04: 55228603-55242625 Gossypium raimondii
Gorai.004G218600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55232626-55242625 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837882 5264 Brassicales-Malvales View MSA
124345507 5266 SBM View MSA
124243289 5268 Malvidae View MSA
124062785 5270 Rosid View MSA
123736748 5271 Pentapetalae View MSA
122792211 5272 Eudicot View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain