Gene : Gorai.004G217500 G. raimondii v2.1
Defline:  (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 Genomic Order:  2175
Name:  ? Gorai.004G217500 Secondary Identifier:  ? PAC:26772705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5098 Gossypium raimondii pathologic  
Graimondii PWY-6927 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G217500 0.5kb upstream 0.5kb upstream 2041 true Chr04: 55090430-55092470 Gossypium raimondii
Gorai.004G217500 0.5kb upstream 0.5kb upstream 500 false Chr04: 55090430-55090929 Gossypium raimondii
Gorai.004G217500 0.5kb downstream 0.5kb downstream 2041 true Chr04: 55090930-55092970 Gossypium raimondii
Gorai.004G217500 0.5kb downstream 0.5kb downstream 500 false Chr04: 55092471-55092970 Gossypium raimondii
Gorai.004G217500 1.0kb upstream 1.0kb upstream 2541 true Chr04: 55089930-55092470 Gossypium raimondii
Gorai.004G217500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55089930-55090929 Gossypium raimondii
Gorai.004G217500 1.0kb downstream 1.0kb downstream 2541 true Chr04: 55090930-55093470 Gossypium raimondii
Gorai.004G217500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55092471-55093470 Gossypium raimondii
Gorai.004G217500 2.0kb upstream 2.0kb upstream 3541 true Chr04: 55088930-55092470 Gossypium raimondii
Gorai.004G217500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55088930-55090929 Gossypium raimondii
Gorai.004G217500 2.0kb downstream 2.0kb downstream 3541 true Chr04: 55090930-55094470 Gossypium raimondii
Gorai.004G217500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55092471-55094470 Gossypium raimondii
Gorai.004G217500 5.0kb upstream 5.0kb upstream 6541 true Chr04: 55085930-55092470 Gossypium raimondii
Gorai.004G217500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55085930-55090929 Gossypium raimondii
Gorai.004G217500 5.0kb downstream 5.0kb downstream 6541 true Chr04: 55090930-55097470 Gossypium raimondii
Gorai.004G217500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55092471-55097470 Gossypium raimondii
Gorai.004G217500 10.0kb upstream 10.0kb upstream 11541 true Chr04: 55080930-55092470 Gossypium raimondii
Gorai.004G217500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55080930-55090929 Gossypium raimondii
Gorai.004G217500 10.0kb downstream 10.0kb downstream 11541 true Chr04: 55090930-55102470 Gossypium raimondii
Gorai.004G217500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55092471-55102470 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
123806129 5264 Brassicales-Malvales Singleton cluster - no MSA
124350747 5266 SBM View MSA
124247394 5268 Malvidae View MSA
124064718 5270 Rosid View MSA
123753508 5271 Pentapetalae View MSA
122795782 5272 Eudicot View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain