Gene : Gorai.004G250400 G. raimondii v2.1
Defline:  (1 of 4) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  2504
Name:  ? Gorai.004G250400 Secondary Identifier:  ? PAC:26772369
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARO-PWY Gossypium raimondii pathologic  
Graimondii PWY-6163 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G250400 0.5kb upstream 0.5kb upstream 4892 true Chr04: 58773127-58778018 Gossypium raimondii
Gorai.004G250400 0.5kb upstream 0.5kb upstream 500 false Chr04: 58773127-58773626 Gossypium raimondii
Gorai.004G250400 0.5kb downstream 0.5kb downstream 4892 true Chr04: 58773627-58778518 Gossypium raimondii
Gorai.004G250400 0.5kb downstream 0.5kb downstream 500 false Chr04: 58778019-58778518 Gossypium raimondii
Gorai.004G250400 1.0kb upstream 1.0kb upstream 5392 true Chr04: 58772627-58778018 Gossypium raimondii
Gorai.004G250400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 58772627-58773626 Gossypium raimondii
Gorai.004G250400 1.0kb downstream 1.0kb downstream 5392 true Chr04: 58773627-58779018 Gossypium raimondii
Gorai.004G250400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 58778019-58779018 Gossypium raimondii
Gorai.004G250400 2.0kb upstream 2.0kb upstream 6392 true Chr04: 58771627-58778018 Gossypium raimondii
Gorai.004G250400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 58771627-58773626 Gossypium raimondii
Gorai.004G250400 2.0kb downstream 2.0kb downstream 6392 true Chr04: 58773627-58780018 Gossypium raimondii
Gorai.004G250400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 58778019-58780018 Gossypium raimondii
Gorai.004G250400 5.0kb upstream 5.0kb upstream 9392 true Chr04: 58768627-58778018 Gossypium raimondii
Gorai.004G250400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 58768627-58773626 Gossypium raimondii
Gorai.004G250400 5.0kb downstream 5.0kb downstream 9392 true Chr04: 58773627-58783018 Gossypium raimondii
Gorai.004G250400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 58778019-58783018 Gossypium raimondii
Gorai.004G250400 10.0kb upstream 10.0kb upstream 14392 true Chr04: 58763627-58778018 Gossypium raimondii
Gorai.004G250400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 58763627-58773626 Gossypium raimondii
Gorai.004G250400 10.0kb downstream 10.0kb downstream 14392 true Chr04: 58773627-58788018 Gossypium raimondii
Gorai.004G250400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 58778019-58788018 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825080 5264 Brassicales-Malvales View MSA
124320447 5266 SBM View MSA
124248451 5268 Malvidae View MSA
124071132 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain