Gene : Gorai.005G003200 G. raimondii v2.1
Defline:  (1 of 35) KOG0417 - Ubiquitin-protein ligase Genomic Order:  33
Name:  ? Gorai.005G003200 Secondary Identifier:  ? PAC:26802976
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G003200 0.5kb upstream 0.5kb upstream 4685 true Chr05: 170795-175479 Gossypium raimondii
Gorai.005G003200 0.5kb upstream 0.5kb upstream 500 false Chr05: 170795-171294 Gossypium raimondii
Gorai.005G003200 0.5kb downstream 0.5kb downstream 4685 true Chr05: 171295-175979 Gossypium raimondii
Gorai.005G003200 0.5kb downstream 0.5kb downstream 500 false Chr05: 175480-175979 Gossypium raimondii
Gorai.005G003200 1.0kb upstream 1.0kb upstream 5185 true Chr05: 170295-175479 Gossypium raimondii
Gorai.005G003200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 170295-171294 Gossypium raimondii
Gorai.005G003200 1.0kb downstream 1.0kb downstream 5185 true Chr05: 171295-176479 Gossypium raimondii
Gorai.005G003200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 175480-176479 Gossypium raimondii
Gorai.005G003200 2.0kb upstream 2.0kb upstream 6185 true Chr05: 169295-175479 Gossypium raimondii
Gorai.005G003200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 169295-171294 Gossypium raimondii
Gorai.005G003200 2.0kb downstream 2.0kb downstream 6185 true Chr05: 171295-177479 Gossypium raimondii
Gorai.005G003200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 175480-177479 Gossypium raimondii
Gorai.005G003200 5.0kb upstream 5.0kb upstream 9185 true Chr05: 166295-175479 Gossypium raimondii
Gorai.005G003200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 166295-171294 Gossypium raimondii
Gorai.005G003200 5.0kb downstream 5.0kb downstream 9185 true Chr05: 171295-180479 Gossypium raimondii
Gorai.005G003200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 175480-180479 Gossypium raimondii
Gorai.005G003200 10.0kb upstream 10.0kb upstream 14185 true Chr05: 161295-175479 Gossypium raimondii
Gorai.005G003200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 161295-171294 Gossypium raimondii
Gorai.005G003200 10.0kb downstream 10.0kb downstream 14185 true Chr05: 171295-185479 Gossypium raimondii
Gorai.005G003200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 175480-185479 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841713 5264 Brassicales-Malvales View MSA
124350709 5266 SBM View MSA
124253903 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain