Gene : Gorai.005G007600 G. raimondii v2.1
Defline:  (1 of 1) PTHR30239:SF3 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 2, CHLOROPLASTIC Genomic Order:  76
Name:  ? Gorai.005G007600 Secondary Identifier:  ? PAC:26801256
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii BRANCHED-CHAIN-AA-SYN-PWY Gossypium raimondii pathologic  
Graimondii ILEUSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-3001 Gossypium raimondii pathologic  
Graimondii VALSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G007600 0.5kb upstream 0.5kb upstream 6180 true Chr05: 523484-529663 Gossypium raimondii
Gorai.005G007600 0.5kb upstream 0.5kb upstream 500 false Chr05: 529164-529663 Gossypium raimondii
Gorai.005G007600 0.5kb downstream 0.5kb downstream 6180 true Chr05: 522984-529163 Gossypium raimondii
Gorai.005G007600 0.5kb downstream 0.5kb downstream 500 false Chr05: 522984-523483 Gossypium raimondii
Gorai.005G007600 1.0kb upstream 1.0kb upstream 6680 true Chr05: 523484-530163 Gossypium raimondii
Gorai.005G007600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 529164-530163 Gossypium raimondii
Gorai.005G007600 1.0kb downstream 1.0kb downstream 6680 true Chr05: 522484-529163 Gossypium raimondii
Gorai.005G007600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 522484-523483 Gossypium raimondii
Gorai.005G007600 2.0kb upstream 2.0kb upstream 7680 true Chr05: 523484-531163 Gossypium raimondii
Gorai.005G007600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 529164-531163 Gossypium raimondii
Gorai.005G007600 2.0kb downstream 2.0kb downstream 7680 true Chr05: 521484-529163 Gossypium raimondii
Gorai.005G007600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 521484-523483 Gossypium raimondii
Gorai.005G007600 5.0kb upstream 5.0kb upstream 10680 true Chr05: 523484-534163 Gossypium raimondii
Gorai.005G007600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 529164-534163 Gossypium raimondii
Gorai.005G007600 5.0kb downstream 5.0kb downstream 10680 true Chr05: 518484-529163 Gossypium raimondii
Gorai.005G007600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 518484-523483 Gossypium raimondii
Gorai.005G007600 10.0kb upstream 10.0kb upstream 15680 true Chr05: 523484-539163 Gossypium raimondii
Gorai.005G007600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 529164-539163 Gossypium raimondii
Gorai.005G007600 10.0kb downstream 10.0kb downstream 15680 true Chr05: 513484-529163 Gossypium raimondii
Gorai.005G007600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 513484-523483 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
123828720 5264 Brassicales-Malvales View MSA
124341997 5266 SBM View MSA
124249637 5268 Malvidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain