Gene : Gorai.005G009200 G. raimondii v2.1

Defline:  (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  92
Name:  ? Gorai.005G009200 Secondary Identifier:  ? PAC:26801423

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G009200 0.5kb upstream 0.5kb upstream 3302 true Chr05: 639043-642344 Gossypium raimondii
Gorai.005G009200 0.5kb upstream 0.5kb upstream 500 false Chr05: 641845-642344 Gossypium raimondii
Gorai.005G009200 0.5kb downstream 0.5kb downstream 3302 true Chr05: 638543-641844 Gossypium raimondii
Gorai.005G009200 0.5kb downstream 0.5kb downstream 500 false Chr05: 638543-639042 Gossypium raimondii
Gorai.005G009200 1.0kb upstream 1.0kb upstream 3802 true Chr05: 639043-642844 Gossypium raimondii
Gorai.005G009200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 641845-642844 Gossypium raimondii
Gorai.005G009200 1.0kb downstream 1.0kb downstream 3802 true Chr05: 638043-641844 Gossypium raimondii
Gorai.005G009200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 638043-639042 Gossypium raimondii
Gorai.005G009200 2.0kb upstream 2.0kb upstream 4802 true Chr05: 639043-643844 Gossypium raimondii
Gorai.005G009200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 641845-643844 Gossypium raimondii
Gorai.005G009200 2.0kb downstream 2.0kb downstream 4802 true Chr05: 637043-641844 Gossypium raimondii
Gorai.005G009200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 637043-639042 Gossypium raimondii
Gorai.005G009200 5.0kb upstream 5.0kb upstream 7802 true Chr05: 639043-646844 Gossypium raimondii
Gorai.005G009200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 641845-646844 Gossypium raimondii
Gorai.005G009200 5.0kb downstream 5.0kb downstream 7802 true Chr05: 634043-641844 Gossypium raimondii
Gorai.005G009200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 634043-639042 Gossypium raimondii
Gorai.005G009200 10.0kb upstream 10.0kb upstream 12802 true Chr05: 639043-651844 Gossypium raimondii
Gorai.005G009200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 641845-651844 Gossypium raimondii
Gorai.005G009200 10.0kb downstream 10.0kb downstream 12802 true Chr05: 629043-641844 Gossypium raimondii
Gorai.005G009200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 629043-639042 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837711 5264 Brassicales-Malvales View MSA
124349519 5266 SBM View MSA
124246468 5268 Malvidae View MSA
124070333 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain