Gene : Gorai.005G021100 G. raimondii v2.1
Defline:  (1 of 16) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  211
Name:  ? Gorai.005G021100 Secondary Identifier:  ? PAC:26806250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G021100 0.5kb upstream 0.5kb upstream 4916 true Chr05: 1736200-1741115 Gossypium raimondii
Gorai.005G021100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1740616-1741115 Gossypium raimondii
Gorai.005G021100 0.5kb downstream 0.5kb downstream 4916 true Chr05: 1735700-1740615 Gossypium raimondii
Gorai.005G021100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1735700-1736199 Gossypium raimondii
Gorai.005G021100 1.0kb upstream 1.0kb upstream 5416 true Chr05: 1736200-1741615 Gossypium raimondii
Gorai.005G021100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1740616-1741615 Gossypium raimondii
Gorai.005G021100 1.0kb downstream 1.0kb downstream 5416 true Chr05: 1735200-1740615 Gossypium raimondii
Gorai.005G021100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1735200-1736199 Gossypium raimondii
Gorai.005G021100 2.0kb upstream 2.0kb upstream 6416 true Chr05: 1736200-1742615 Gossypium raimondii
Gorai.005G021100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1740616-1742615 Gossypium raimondii
Gorai.005G021100 2.0kb downstream 2.0kb downstream 6416 true Chr05: 1734200-1740615 Gossypium raimondii
Gorai.005G021100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1734200-1736199 Gossypium raimondii
Gorai.005G021100 5.0kb upstream 5.0kb upstream 9416 true Chr05: 1736200-1745615 Gossypium raimondii
Gorai.005G021100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1740616-1745615 Gossypium raimondii
Gorai.005G021100 5.0kb downstream 5.0kb downstream 9416 true Chr05: 1731200-1740615 Gossypium raimondii
Gorai.005G021100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1731200-1736199 Gossypium raimondii
Gorai.005G021100 10.0kb upstream 10.0kb upstream 14416 true Chr05: 1736200-1750615 Gossypium raimondii
Gorai.005G021100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1740616-1750615 Gossypium raimondii
Gorai.005G021100 10.0kb downstream 10.0kb downstream 14416 true Chr05: 1726200-1740615 Gossypium raimondii
Gorai.005G021100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1726200-1736199 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807545 5264 Brassicales-Malvales Singleton cluster - no MSA
124304406 5266 SBM Singleton cluster - no MSA
124154923 5268 Malvidae Singleton cluster - no MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain