Gene : Gorai.005G045400 G. raimondii v2.1
Defline:  (1 of 1) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  454
Name:  ? Gorai.005G045400 Secondary Identifier:  ? PAC:26803639
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-4361 Gossypium raimondii pathologic  
Graimondii PWY-5389 Gossypium raimondii pathologic  
Graimondii PWY-7270 Gossypium raimondii pathologic  
Graimondii PWY-7528 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G045400 0.5kb upstream 0.5kb upstream 3247 true Chr05: 4317351-4320597 Gossypium raimondii
Gorai.005G045400 0.5kb upstream 0.5kb upstream 500 false Chr05: 4317351-4317850 Gossypium raimondii
Gorai.005G045400 0.5kb downstream 0.5kb downstream 3247 true Chr05: 4317851-4321097 Gossypium raimondii
Gorai.005G045400 0.5kb downstream 0.5kb downstream 500 false Chr05: 4320598-4321097 Gossypium raimondii
Gorai.005G045400 1.0kb upstream 1.0kb upstream 3747 true Chr05: 4316851-4320597 Gossypium raimondii
Gorai.005G045400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4316851-4317850 Gossypium raimondii
Gorai.005G045400 1.0kb downstream 1.0kb downstream 3747 true Chr05: 4317851-4321597 Gossypium raimondii
Gorai.005G045400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4320598-4321597 Gossypium raimondii
Gorai.005G045400 2.0kb upstream 2.0kb upstream 4747 true Chr05: 4315851-4320597 Gossypium raimondii
Gorai.005G045400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4315851-4317850 Gossypium raimondii
Gorai.005G045400 2.0kb downstream 2.0kb downstream 4747 true Chr05: 4317851-4322597 Gossypium raimondii
Gorai.005G045400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4320598-4322597 Gossypium raimondii
Gorai.005G045400 5.0kb upstream 5.0kb upstream 7747 true Chr05: 4312851-4320597 Gossypium raimondii
Gorai.005G045400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4312851-4317850 Gossypium raimondii
Gorai.005G045400 5.0kb downstream 5.0kb downstream 7747 true Chr05: 4317851-4325597 Gossypium raimondii
Gorai.005G045400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4320598-4325597 Gossypium raimondii
Gorai.005G045400 10.0kb upstream 10.0kb upstream 12747 true Chr05: 4307851-4320597 Gossypium raimondii
Gorai.005G045400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4307851-4317850 Gossypium raimondii
Gorai.005G045400 10.0kb downstream 10.0kb downstream 12747 true Chr05: 4317851-4330597 Gossypium raimondii
Gorai.005G045400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4320598-4330597 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834658 5264 Brassicales-Malvales View MSA
124340730 5266 SBM View MSA
124241214 5268 Malvidae View MSA
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain