Gene : Gorai.005G050900 G. raimondii v2.1
Defline:  (1 of 2) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  509
Name:  ? Gorai.005G050900 Secondary Identifier:  ? PAC:26805954
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G050900 0.5kb upstream 0.5kb upstream 7968 true Chr05: 5030235-5038202 Gossypium raimondii
Gorai.005G050900 0.5kb upstream 0.5kb upstream 500 false Chr05: 5030235-5030734 Gossypium raimondii
Gorai.005G050900 0.5kb downstream 0.5kb downstream 7968 true Chr05: 5030735-5038702 Gossypium raimondii
Gorai.005G050900 0.5kb downstream 0.5kb downstream 500 false Chr05: 5038203-5038702 Gossypium raimondii
Gorai.005G050900 1.0kb upstream 1.0kb upstream 8468 true Chr05: 5029735-5038202 Gossypium raimondii
Gorai.005G050900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5029735-5030734 Gossypium raimondii
Gorai.005G050900 1.0kb downstream 1.0kb downstream 8468 true Chr05: 5030735-5039202 Gossypium raimondii
Gorai.005G050900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5038203-5039202 Gossypium raimondii
Gorai.005G050900 2.0kb upstream 2.0kb upstream 9468 true Chr05: 5028735-5038202 Gossypium raimondii
Gorai.005G050900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5028735-5030734 Gossypium raimondii
Gorai.005G050900 2.0kb downstream 2.0kb downstream 9468 true Chr05: 5030735-5040202 Gossypium raimondii
Gorai.005G050900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5038203-5040202 Gossypium raimondii
Gorai.005G050900 5.0kb upstream 5.0kb upstream 12468 true Chr05: 5025735-5038202 Gossypium raimondii
Gorai.005G050900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5025735-5030734 Gossypium raimondii
Gorai.005G050900 5.0kb downstream 5.0kb downstream 12468 true Chr05: 5030735-5043202 Gossypium raimondii
Gorai.005G050900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5038203-5043202 Gossypium raimondii
Gorai.005G050900 10.0kb upstream 10.0kb upstream 17468 true Chr05: 5020735-5038202 Gossypium raimondii
Gorai.005G050900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5020735-5030734 Gossypium raimondii
Gorai.005G050900 10.0kb downstream 10.0kb downstream 17468 true Chr05: 5030735-5048202 Gossypium raimondii
Gorai.005G050900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5038203-5048202 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807510 5264 Brassicales-Malvales Singleton cluster - no MSA
124304373 5266 SBM Singleton cluster - no MSA
124253740 5268 Malvidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain