Gene : Gorai.005G050400 G. raimondii v2.1
Defline:  (1 of 5) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  504
Name:  ? Gorai.005G050400 Secondary Identifier:  ? PAC:26804307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G050400 0.5kb upstream 0.5kb upstream 1585 true Chr05: 4961133-4962717 Gossypium raimondii
Gorai.005G050400 0.5kb upstream 0.5kb upstream 500 false Chr05: 4961133-4961632 Gossypium raimondii
Gorai.005G050400 0.5kb downstream 0.5kb downstream 1585 true Chr05: 4961633-4963217 Gossypium raimondii
Gorai.005G050400 0.5kb downstream 0.5kb downstream 500 false Chr05: 4962718-4963217 Gossypium raimondii
Gorai.005G050400 1.0kb upstream 1.0kb upstream 2085 true Chr05: 4960633-4962717 Gossypium raimondii
Gorai.005G050400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4960633-4961632 Gossypium raimondii
Gorai.005G050400 1.0kb downstream 1.0kb downstream 2085 true Chr05: 4961633-4963717 Gossypium raimondii
Gorai.005G050400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4962718-4963717 Gossypium raimondii
Gorai.005G050400 2.0kb upstream 2.0kb upstream 3085 true Chr05: 4959633-4962717 Gossypium raimondii
Gorai.005G050400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4959633-4961632 Gossypium raimondii
Gorai.005G050400 2.0kb downstream 2.0kb downstream 3085 true Chr05: 4961633-4964717 Gossypium raimondii
Gorai.005G050400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4962718-4964717 Gossypium raimondii
Gorai.005G050400 5.0kb upstream 5.0kb upstream 6085 true Chr05: 4956633-4962717 Gossypium raimondii
Gorai.005G050400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4956633-4961632 Gossypium raimondii
Gorai.005G050400 5.0kb downstream 5.0kb downstream 6085 true Chr05: 4961633-4967717 Gossypium raimondii
Gorai.005G050400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4962718-4967717 Gossypium raimondii
Gorai.005G050400 10.0kb upstream 10.0kb upstream 11085 true Chr05: 4951633-4962717 Gossypium raimondii
Gorai.005G050400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4951633-4961632 Gossypium raimondii
Gorai.005G050400 10.0kb downstream 10.0kb downstream 11085 true Chr05: 4961633-4972717 Gossypium raimondii
Gorai.005G050400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4962718-4972717 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839576 5264 Brassicales-Malvales View MSA
124351624 5266 SBM View MSA
124253434 5268 Malvidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain