Gene : Gorai.005G047100 G. raimondii v2.1
Defline:  (1 of 5) PTHR13301//PTHR13301:SF41 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  471
Name:  ? Gorai.005G047100 Secondary Identifier:  ? PAC:26805802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1001 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G047100 0.5kb upstream 0.5kb upstream 4729 true Chr05: 4473966-4478694 Gossypium raimondii
Gorai.005G047100 0.5kb upstream 0.5kb upstream 500 false Chr05: 4478195-4478694 Gossypium raimondii
Gorai.005G047100 0.5kb downstream 0.5kb downstream 4729 true Chr05: 4473466-4478194 Gossypium raimondii
Gorai.005G047100 0.5kb downstream 0.5kb downstream 500 false Chr05: 4473466-4473965 Gossypium raimondii
Gorai.005G047100 1.0kb upstream 1.0kb upstream 5229 true Chr05: 4473966-4479194 Gossypium raimondii
Gorai.005G047100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4478195-4479194 Gossypium raimondii
Gorai.005G047100 1.0kb downstream 1.0kb downstream 5229 true Chr05: 4472966-4478194 Gossypium raimondii
Gorai.005G047100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4472966-4473965 Gossypium raimondii
Gorai.005G047100 2.0kb upstream 2.0kb upstream 6229 true Chr05: 4473966-4480194 Gossypium raimondii
Gorai.005G047100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4478195-4480194 Gossypium raimondii
Gorai.005G047100 2.0kb downstream 2.0kb downstream 6229 true Chr05: 4471966-4478194 Gossypium raimondii
Gorai.005G047100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4471966-4473965 Gossypium raimondii
Gorai.005G047100 5.0kb upstream 5.0kb upstream 9229 true Chr05: 4473966-4483194 Gossypium raimondii
Gorai.005G047100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4478195-4483194 Gossypium raimondii
Gorai.005G047100 5.0kb downstream 5.0kb downstream 9229 true Chr05: 4468966-4478194 Gossypium raimondii
Gorai.005G047100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4468966-4473965 Gossypium raimondii
Gorai.005G047100 10.0kb upstream 10.0kb upstream 14229 true Chr05: 4473966-4488194 Gossypium raimondii
Gorai.005G047100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4478195-4488194 Gossypium raimondii
Gorai.005G047100 10.0kb downstream 10.0kb downstream 14229 true Chr05: 4463966-4478194 Gossypium raimondii
Gorai.005G047100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4463966-4473965 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824236 5264 Brassicales-Malvales View MSA
124351489 5266 SBM View MSA
124253777 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain