Gene : Gorai.005G055800 G. raimondii v2.1
Defline:  (1 of 3) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  558
Name:  ? Gorai.005G055800 Secondary Identifier:  ? PAC:26801328
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARGSPECAT-PWY Gossypium raimondii pathologic  
Graimondii BSUBPOLYAMSYN-PWY Gossypium raimondii pathologic  
Graimondii POLYAMINSYN3-PWY Gossypium raimondii pathologic  
Graimondii PWY-7528 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G055800 0.5kb upstream 0.5kb upstream 2486 true Chr05: 5672782-5675267 Gossypium raimondii
Gorai.005G055800 0.5kb upstream 0.5kb upstream 500 false Chr05: 5672782-5673281 Gossypium raimondii
Gorai.005G055800 0.5kb downstream 0.5kb downstream 2486 true Chr05: 5673282-5675767 Gossypium raimondii
Gorai.005G055800 0.5kb downstream 0.5kb downstream 500 false Chr05: 5675268-5675767 Gossypium raimondii
Gorai.005G055800 1.0kb upstream 1.0kb upstream 2986 true Chr05: 5672282-5675267 Gossypium raimondii
Gorai.005G055800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5672282-5673281 Gossypium raimondii
Gorai.005G055800 1.0kb downstream 1.0kb downstream 2986 true Chr05: 5673282-5676267 Gossypium raimondii
Gorai.005G055800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5675268-5676267 Gossypium raimondii
Gorai.005G055800 2.0kb upstream 2.0kb upstream 3986 true Chr05: 5671282-5675267 Gossypium raimondii
Gorai.005G055800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5671282-5673281 Gossypium raimondii
Gorai.005G055800 2.0kb downstream 2.0kb downstream 3986 true Chr05: 5673282-5677267 Gossypium raimondii
Gorai.005G055800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5675268-5677267 Gossypium raimondii
Gorai.005G055800 5.0kb upstream 5.0kb upstream 6986 true Chr05: 5668282-5675267 Gossypium raimondii
Gorai.005G055800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5668282-5673281 Gossypium raimondii
Gorai.005G055800 5.0kb downstream 5.0kb downstream 6986 true Chr05: 5673282-5680267 Gossypium raimondii
Gorai.005G055800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5675268-5680267 Gossypium raimondii
Gorai.005G055800 10.0kb upstream 10.0kb upstream 11986 true Chr05: 5663282-5675267 Gossypium raimondii
Gorai.005G055800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5663282-5673281 Gossypium raimondii
Gorai.005G055800 10.0kb downstream 10.0kb downstream 11986 true Chr05: 5673282-5685267 Gossypium raimondii
Gorai.005G055800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5675268-5685267 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835642 5264 Brassicales-Malvales View MSA
124338711 5266 SBM View MSA
124250862 5268 Malvidae View MSA
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain