Gene : Gorai.005G052900 G. raimondii v2.1
Defline:  (1 of 6) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  529
Name:  ? Gorai.005G052900 Secondary Identifier:  ? PAC:26804517
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CHLOROPHYLL-SYN Gossypium raimondii pathologic  
Graimondii HEME-BIOSYNTHESIS-II Gossypium raimondii pathologic  
Graimondii PWY-4942 Gossypium raimondii pathologic  
Graimondii PWY-5918 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G052900 0.5kb upstream 0.5kb upstream 11240 true Chr05: 5233377-5244616 Gossypium raimondii
Gorai.005G052900 0.5kb upstream 0.5kb upstream 500 false Chr05: 5233377-5233876 Gossypium raimondii
Gorai.005G052900 0.5kb downstream 0.5kb downstream 11240 true Chr05: 5233877-5245116 Gossypium raimondii
Gorai.005G052900 0.5kb downstream 0.5kb downstream 500 false Chr05: 5244617-5245116 Gossypium raimondii
Gorai.005G052900 1.0kb upstream 1.0kb upstream 11740 true Chr05: 5232877-5244616 Gossypium raimondii
Gorai.005G052900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5232877-5233876 Gossypium raimondii
Gorai.005G052900 1.0kb downstream 1.0kb downstream 11740 true Chr05: 5233877-5245616 Gossypium raimondii
Gorai.005G052900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5244617-5245616 Gossypium raimondii
Gorai.005G052900 2.0kb upstream 2.0kb upstream 12740 true Chr05: 5231877-5244616 Gossypium raimondii
Gorai.005G052900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5231877-5233876 Gossypium raimondii
Gorai.005G052900 2.0kb downstream 2.0kb downstream 12740 true Chr05: 5233877-5246616 Gossypium raimondii
Gorai.005G052900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5244617-5246616 Gossypium raimondii
Gorai.005G052900 5.0kb upstream 5.0kb upstream 15740 true Chr05: 5228877-5244616 Gossypium raimondii
Gorai.005G052900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5228877-5233876 Gossypium raimondii
Gorai.005G052900 5.0kb downstream 5.0kb downstream 15740 true Chr05: 5233877-5249616 Gossypium raimondii
Gorai.005G052900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5244617-5249616 Gossypium raimondii
Gorai.005G052900 10.0kb upstream 10.0kb upstream 20740 true Chr05: 5223877-5244616 Gossypium raimondii
Gorai.005G052900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5223877-5233876 Gossypium raimondii
Gorai.005G052900 10.0kb downstream 10.0kb downstream 20740 true Chr05: 5233877-5254616 Gossypium raimondii
Gorai.005G052900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5244617-5254616 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828465 5264 Brassicales-Malvales View MSA
124338793 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain