Gene : Gorai.012G040000 G. raimondii v2.1
Defline:  (1 of 3) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  400
Name:  ? Gorai.012G040000 Secondary Identifier:  ? PAC:26828884
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6773 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G040000 0.5kb upstream 0.5kb upstream 24722 true Chr12: 4963730-4988451 Gossypium raimondii
Gorai.012G040000 0.5kb upstream 0.5kb upstream 500 false Chr12: 4963730-4964229 Gossypium raimondii
Gorai.012G040000 0.5kb downstream 0.5kb downstream 24722 true Chr12: 4964230-4988951 Gossypium raimondii
Gorai.012G040000 0.5kb downstream 0.5kb downstream 500 false Chr12: 4988452-4988951 Gossypium raimondii
Gorai.012G040000 1.0kb upstream 1.0kb upstream 25222 true Chr12: 4963230-4988451 Gossypium raimondii
Gorai.012G040000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4963230-4964229 Gossypium raimondii
Gorai.012G040000 1.0kb downstream 1.0kb downstream 25222 true Chr12: 4964230-4989451 Gossypium raimondii
Gorai.012G040000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4988452-4989451 Gossypium raimondii
Gorai.012G040000 2.0kb upstream 2.0kb upstream 26222 true Chr12: 4962230-4988451 Gossypium raimondii
Gorai.012G040000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4962230-4964229 Gossypium raimondii
Gorai.012G040000 2.0kb downstream 2.0kb downstream 26222 true Chr12: 4964230-4990451 Gossypium raimondii
Gorai.012G040000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4988452-4990451 Gossypium raimondii
Gorai.012G040000 5.0kb upstream 5.0kb upstream 29222 true Chr12: 4959230-4988451 Gossypium raimondii
Gorai.012G040000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4959230-4964229 Gossypium raimondii
Gorai.012G040000 5.0kb downstream 5.0kb downstream 29222 true Chr12: 4964230-4993451 Gossypium raimondii
Gorai.012G040000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4988452-4993451 Gossypium raimondii
Gorai.012G040000 10.0kb upstream 10.0kb upstream 34222 true Chr12: 4954230-4988451 Gossypium raimondii
Gorai.012G040000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4954230-4964229 Gossypium raimondii
Gorai.012G040000 10.0kb downstream 10.0kb downstream 34222 true Chr12: 4964230-4998451 Gossypium raimondii
Gorai.012G040000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4988452-4998451 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839457 5264 Brassicales-Malvales View MSA
124345846 5266 SBM View MSA
124242779 5268 Malvidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain