Gene : Gorai.012G134900 G. raimondii v2.1
Defline:  (1 of 4) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  1349
Name:  ? Gorai.012G134900 Secondary Identifier:  ? PAC:26825685
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G134900 0.5kb upstream 0.5kb upstream 4726 true Chr12: 30711714-30716439 Gossypium raimondii
Gorai.012G134900 0.5kb upstream 0.5kb upstream 500 false Chr12: 30711714-30712213 Gossypium raimondii
Gorai.012G134900 0.5kb downstream 0.5kb downstream 4726 true Chr12: 30712214-30716939 Gossypium raimondii
Gorai.012G134900 0.5kb downstream 0.5kb downstream 500 false Chr12: 30716440-30716939 Gossypium raimondii
Gorai.012G134900 1.0kb upstream 1.0kb upstream 5226 true Chr12: 30711214-30716439 Gossypium raimondii
Gorai.012G134900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 30711214-30712213 Gossypium raimondii
Gorai.012G134900 1.0kb downstream 1.0kb downstream 5226 true Chr12: 30712214-30717439 Gossypium raimondii
Gorai.012G134900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 30716440-30717439 Gossypium raimondii
Gorai.012G134900 2.0kb upstream 2.0kb upstream 6226 true Chr12: 30710214-30716439 Gossypium raimondii
Gorai.012G134900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 30710214-30712213 Gossypium raimondii
Gorai.012G134900 2.0kb downstream 2.0kb downstream 6226 true Chr12: 30712214-30718439 Gossypium raimondii
Gorai.012G134900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 30716440-30718439 Gossypium raimondii
Gorai.012G134900 5.0kb upstream 5.0kb upstream 9226 true Chr12: 30707214-30716439 Gossypium raimondii
Gorai.012G134900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 30707214-30712213 Gossypium raimondii
Gorai.012G134900 5.0kb downstream 5.0kb downstream 9226 true Chr12: 30712214-30721439 Gossypium raimondii
Gorai.012G134900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 30716440-30721439 Gossypium raimondii
Gorai.012G134900 10.0kb upstream 10.0kb upstream 14226 true Chr12: 30702214-30716439 Gossypium raimondii
Gorai.012G134900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 30702214-30712213 Gossypium raimondii
Gorai.012G134900 10.0kb downstream 10.0kb downstream 14226 true Chr12: 30712214-30726439 Gossypium raimondii
Gorai.012G134900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 30716440-30726439 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835862 5264 Brassicales-Malvales View MSA
124340184 5266 SBM View MSA
124254333 5268 Malvidae View MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain