Gene : Gorai.012G123800 G. raimondii v2.1
Defline:  (1 of 3) PTHR15184:SF45 - ATP SYNTHASE SUBUNIT BETA-1, MITOCHONDRIAL-RELATED Genomic Order:  1238
Name:  ? Gorai.012G123800 Secondary Identifier:  ? PAC:26828404
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G123800 0.5kb upstream 0.5kb upstream 16570 true Chr12: 28582192-28598761 Gossypium raimondii
Gorai.012G123800 0.5kb upstream 0.5kb upstream 500 false Chr12: 28598262-28598761 Gossypium raimondii
Gorai.012G123800 0.5kb downstream 0.5kb downstream 16570 true Chr12: 28581692-28598261 Gossypium raimondii
Gorai.012G123800 0.5kb downstream 0.5kb downstream 500 false Chr12: 28581692-28582191 Gossypium raimondii
Gorai.012G123800 1.0kb upstream 1.0kb upstream 17070 true Chr12: 28582192-28599261 Gossypium raimondii
Gorai.012G123800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 28598262-28599261 Gossypium raimondii
Gorai.012G123800 1.0kb downstream 1.0kb downstream 17070 true Chr12: 28581192-28598261 Gossypium raimondii
Gorai.012G123800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 28581192-28582191 Gossypium raimondii
Gorai.012G123800 2.0kb upstream 2.0kb upstream 18070 true Chr12: 28582192-28600261 Gossypium raimondii
Gorai.012G123800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 28598262-28600261 Gossypium raimondii
Gorai.012G123800 2.0kb downstream 2.0kb downstream 18070 true Chr12: 28580192-28598261 Gossypium raimondii
Gorai.012G123800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 28580192-28582191 Gossypium raimondii
Gorai.012G123800 5.0kb upstream 5.0kb upstream 21070 true Chr12: 28582192-28603261 Gossypium raimondii
Gorai.012G123800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 28598262-28603261 Gossypium raimondii
Gorai.012G123800 5.0kb downstream 5.0kb downstream 21070 true Chr12: 28577192-28598261 Gossypium raimondii
Gorai.012G123800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 28577192-28582191 Gossypium raimondii
Gorai.012G123800 10.0kb upstream 10.0kb upstream 26070 true Chr12: 28582192-28608261 Gossypium raimondii
Gorai.012G123800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 28598262-28608261 Gossypium raimondii
Gorai.012G123800 10.0kb downstream 10.0kb downstream 26070 true Chr12: 28572192-28598261 Gossypium raimondii
Gorai.012G123800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 28572192-28582191 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831006 5264 Brassicales-Malvales View MSA
124350602 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain