Gene : Gorai.012G111400 G. raimondii v2.1
Defline:  (1 of 3) PTHR22855:SF38 - ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA, CHLOROPLASTIC Genomic Order:  1114
Name:  ? Gorai.012G111400 Secondary Identifier:  ? PAC:26826662
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1264 Gossypium raimondii pathologic  
Graimondii PWY-4381 Gossypium raimondii pathologic  
Graimondii PWY-5156 Gossypium raimondii pathologic  
Graimondii PWY-7388 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G111400 0.5kb upstream 0.5kb upstream 6232 true Chr12: 25133308-25139539 Gossypium raimondii
Gorai.012G111400 0.5kb upstream 0.5kb upstream 500 false Chr12: 25133308-25133807 Gossypium raimondii
Gorai.012G111400 0.5kb downstream 0.5kb downstream 6232 true Chr12: 25133808-25140039 Gossypium raimondii
Gorai.012G111400 0.5kb downstream 0.5kb downstream 500 false Chr12: 25139540-25140039 Gossypium raimondii
Gorai.012G111400 1.0kb upstream 1.0kb upstream 6732 true Chr12: 25132808-25139539 Gossypium raimondii
Gorai.012G111400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 25132808-25133807 Gossypium raimondii
Gorai.012G111400 1.0kb downstream 1.0kb downstream 6732 true Chr12: 25133808-25140539 Gossypium raimondii
Gorai.012G111400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 25139540-25140539 Gossypium raimondii
Gorai.012G111400 2.0kb upstream 2.0kb upstream 7732 true Chr12: 25131808-25139539 Gossypium raimondii
Gorai.012G111400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 25131808-25133807 Gossypium raimondii
Gorai.012G111400 2.0kb downstream 2.0kb downstream 7732 true Chr12: 25133808-25141539 Gossypium raimondii
Gorai.012G111400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 25139540-25141539 Gossypium raimondii
Gorai.012G111400 5.0kb upstream 5.0kb upstream 10732 true Chr12: 25128808-25139539 Gossypium raimondii
Gorai.012G111400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 25128808-25133807 Gossypium raimondii
Gorai.012G111400 5.0kb downstream 5.0kb downstream 10732 true Chr12: 25133808-25144539 Gossypium raimondii
Gorai.012G111400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 25139540-25144539 Gossypium raimondii
Gorai.012G111400 10.0kb upstream 10.0kb upstream 15732 true Chr12: 25123808-25139539 Gossypium raimondii
Gorai.012G111400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 25123808-25133807 Gossypium raimondii
Gorai.012G111400 10.0kb downstream 10.0kb downstream 15732 true Chr12: 25133808-25149539 Gossypium raimondii
Gorai.012G111400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 25139540-25149539 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830814 5264 Brassicales-Malvales View MSA
124338101 5266 SBM View MSA
124242928 5268 Malvidae View MSA
124065453 5270 Rosid View MSA
123737036 5271 Pentapetalae View MSA
122792152 5272 Eudicot View MSA
122047100 5273 Angiosperm View MSA
121351185 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain