Gene : Gorai.012G109700 G. raimondii v2.1
Defline:  (1 of 6) PTHR11709:SF9 - LACCASE-7-RELATED Genomic Order:  1097
Name:  ? Gorai.012G109700 Secondary Identifier:  ? PAC:26826134
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G109700 0.5kb upstream 0.5kb upstream 3613 true Chr12: 24840477-24844089 Gossypium raimondii
Gorai.012G109700 0.5kb upstream 0.5kb upstream 500 false Chr12: 24840477-24840976 Gossypium raimondii
Gorai.012G109700 0.5kb downstream 0.5kb downstream 3613 true Chr12: 24840977-24844589 Gossypium raimondii
Gorai.012G109700 0.5kb downstream 0.5kb downstream 500 false Chr12: 24844090-24844589 Gossypium raimondii
Gorai.012G109700 1.0kb upstream 1.0kb upstream 4113 true Chr12: 24839977-24844089 Gossypium raimondii
Gorai.012G109700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 24839977-24840976 Gossypium raimondii
Gorai.012G109700 1.0kb downstream 1.0kb downstream 4113 true Chr12: 24840977-24845089 Gossypium raimondii
Gorai.012G109700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 24844090-24845089 Gossypium raimondii
Gorai.012G109700 2.0kb upstream 2.0kb upstream 5113 true Chr12: 24838977-24844089 Gossypium raimondii
Gorai.012G109700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 24838977-24840976 Gossypium raimondii
Gorai.012G109700 2.0kb downstream 2.0kb downstream 5113 true Chr12: 24840977-24846089 Gossypium raimondii
Gorai.012G109700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 24844090-24846089 Gossypium raimondii
Gorai.012G109700 5.0kb upstream 5.0kb upstream 8113 true Chr12: 24835977-24844089 Gossypium raimondii
Gorai.012G109700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 24835977-24840976 Gossypium raimondii
Gorai.012G109700 5.0kb downstream 5.0kb downstream 8113 true Chr12: 24840977-24849089 Gossypium raimondii
Gorai.012G109700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 24844090-24849089 Gossypium raimondii
Gorai.012G109700 10.0kb upstream 10.0kb upstream 13113 true Chr12: 24830977-24844089 Gossypium raimondii
Gorai.012G109700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 24830977-24840976 Gossypium raimondii
Gorai.012G109700 10.0kb downstream 10.0kb downstream 13113 true Chr12: 24840977-24854089 Gossypium raimondii
Gorai.012G109700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 24844090-24854089 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835955 5264 Brassicales-Malvales View MSA
124351381 5266 SBM View MSA
124241371 5268 Malvidae View MSA
124063010 5270 Rosid View MSA
123744163 5271 Pentapetalae View MSA
122787244 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain