Gene : Gorai.012G116000 G. raimondii v2.1
Defline:  (1 of 1) PTHR11048:SF18 - CHLOROPHYLL SYNTHASE, CHLOROPLASTIC Genomic Order:  1160
Name:  ? Gorai.012G116000 Secondary Identifier:  ? PAC:26825234
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5064 Gossypium raimondii pathologic  
Graimondii PWY-5068 Gossypium raimondii pathologic  
Graimondii PWY-5086 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G116000 0.5kb upstream 0.5kb upstream 4437 true Chr12: 26797381-26801817 Gossypium raimondii
Gorai.012G116000 0.5kb upstream 0.5kb upstream 500 false Chr12: 26797381-26797880 Gossypium raimondii
Gorai.012G116000 0.5kb downstream 0.5kb downstream 4437 true Chr12: 26797881-26802317 Gossypium raimondii
Gorai.012G116000 0.5kb downstream 0.5kb downstream 500 false Chr12: 26801818-26802317 Gossypium raimondii
Gorai.012G116000 1.0kb upstream 1.0kb upstream 4937 true Chr12: 26796881-26801817 Gossypium raimondii
Gorai.012G116000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 26796881-26797880 Gossypium raimondii
Gorai.012G116000 1.0kb downstream 1.0kb downstream 4937 true Chr12: 26797881-26802817 Gossypium raimondii
Gorai.012G116000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 26801818-26802817 Gossypium raimondii
Gorai.012G116000 2.0kb upstream 2.0kb upstream 5937 true Chr12: 26795881-26801817 Gossypium raimondii
Gorai.012G116000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 26795881-26797880 Gossypium raimondii
Gorai.012G116000 2.0kb downstream 2.0kb downstream 5937 true Chr12: 26797881-26803817 Gossypium raimondii
Gorai.012G116000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 26801818-26803817 Gossypium raimondii
Gorai.012G116000 5.0kb upstream 5.0kb upstream 8937 true Chr12: 26792881-26801817 Gossypium raimondii
Gorai.012G116000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 26792881-26797880 Gossypium raimondii
Gorai.012G116000 5.0kb downstream 5.0kb downstream 8937 true Chr12: 26797881-26806817 Gossypium raimondii
Gorai.012G116000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 26801818-26806817 Gossypium raimondii
Gorai.012G116000 10.0kb upstream 10.0kb upstream 13937 true Chr12: 26787881-26801817 Gossypium raimondii
Gorai.012G116000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 26787881-26797880 Gossypium raimondii
Gorai.012G116000 10.0kb downstream 10.0kb downstream 13937 true Chr12: 26797881-26811817 Gossypium raimondii
Gorai.012G116000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 26801818-26811817 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840816 5264 Brassicales-Malvales View MSA
124343862 5266 SBM View MSA
124242139 5268 Malvidae View MSA
124067560 5270 Rosid View MSA
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain