Gene : Gorai.012G002300 G. raimondii v2.1
Defline:  (1 of 2) PTHR12526:SF17 - STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  23
Name:  ? Gorai.012G002300 Secondary Identifier:  ? PAC:26825622
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYCOGENSYNTH-PWY Gossypium raimondii pathologic  
Graimondii PWY-622 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G002300 0.5kb upstream 0.5kb upstream 7714 true Chr12: 246780-254493 Gossypium raimondii
Gorai.012G002300 0.5kb upstream 0.5kb upstream 500 false Chr12: 253994-254493 Gossypium raimondii
Gorai.012G002300 0.5kb downstream 0.5kb downstream 7714 true Chr12: 246280-253993 Gossypium raimondii
Gorai.012G002300 0.5kb downstream 0.5kb downstream 500 false Chr12: 246280-246779 Gossypium raimondii
Gorai.012G002300 1.0kb upstream 1.0kb upstream 8214 true Chr12: 246780-254993 Gossypium raimondii
Gorai.012G002300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 253994-254993 Gossypium raimondii
Gorai.012G002300 1.0kb downstream 1.0kb downstream 8214 true Chr12: 245780-253993 Gossypium raimondii
Gorai.012G002300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 245780-246779 Gossypium raimondii
Gorai.012G002300 2.0kb upstream 2.0kb upstream 9214 true Chr12: 246780-255993 Gossypium raimondii
Gorai.012G002300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 253994-255993 Gossypium raimondii
Gorai.012G002300 2.0kb downstream 2.0kb downstream 9214 true Chr12: 244780-253993 Gossypium raimondii
Gorai.012G002300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 244780-246779 Gossypium raimondii
Gorai.012G002300 5.0kb upstream 5.0kb upstream 12214 true Chr12: 246780-258993 Gossypium raimondii
Gorai.012G002300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 253994-258993 Gossypium raimondii
Gorai.012G002300 5.0kb downstream 5.0kb downstream 12214 true Chr12: 241780-253993 Gossypium raimondii
Gorai.012G002300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 241780-246779 Gossypium raimondii
Gorai.012G002300 10.0kb upstream 10.0kb upstream 17214 true Chr12: 246780-263993 Gossypium raimondii
Gorai.012G002300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 253994-263993 Gossypium raimondii
Gorai.012G002300 10.0kb downstream 10.0kb downstream 17214 true Chr12: 236780-253993 Gossypium raimondii
Gorai.012G002300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 236780-246779 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838245 5264 Brassicales-Malvales View MSA
124341785 5266 SBM View MSA
124239444 5268 Malvidae View MSA
124060940 5270 Rosid View MSA
123737274 5271 Pentapetalae View MSA
122791286 5272 Eudicot View MSA
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain