Gene : Gorai.012G131700 G. raimondii v2.1
Defline:  (1 of 2) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT Genomic Order:  1317
Name:  ? Gorai.012G131700 Secondary Identifier:  ? PAC:26825498
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7279 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G131700 0.5kb upstream 0.5kb upstream 4765 true Chr12: 30071408-30076172 Gossypium raimondii
Gorai.012G131700 0.5kb upstream 0.5kb upstream 500 false Chr12: 30071408-30071907 Gossypium raimondii
Gorai.012G131700 0.5kb downstream 0.5kb downstream 4765 true Chr12: 30071908-30076672 Gossypium raimondii
Gorai.012G131700 0.5kb downstream 0.5kb downstream 500 false Chr12: 30076173-30076672 Gossypium raimondii
Gorai.012G131700 1.0kb upstream 1.0kb upstream 5265 true Chr12: 30070908-30076172 Gossypium raimondii
Gorai.012G131700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 30070908-30071907 Gossypium raimondii
Gorai.012G131700 1.0kb downstream 1.0kb downstream 5265 true Chr12: 30071908-30077172 Gossypium raimondii
Gorai.012G131700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 30076173-30077172 Gossypium raimondii
Gorai.012G131700 2.0kb upstream 2.0kb upstream 6265 true Chr12: 30069908-30076172 Gossypium raimondii
Gorai.012G131700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 30069908-30071907 Gossypium raimondii
Gorai.012G131700 2.0kb downstream 2.0kb downstream 6265 true Chr12: 30071908-30078172 Gossypium raimondii
Gorai.012G131700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 30076173-30078172 Gossypium raimondii
Gorai.012G131700 5.0kb upstream 5.0kb upstream 9265 true Chr12: 30066908-30076172 Gossypium raimondii
Gorai.012G131700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 30066908-30071907 Gossypium raimondii
Gorai.012G131700 5.0kb downstream 5.0kb downstream 9265 true Chr12: 30071908-30081172 Gossypium raimondii
Gorai.012G131700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 30076173-30081172 Gossypium raimondii
Gorai.012G131700 10.0kb upstream 10.0kb upstream 14265 true Chr12: 30061908-30076172 Gossypium raimondii
Gorai.012G131700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 30061908-30071907 Gossypium raimondii
Gorai.012G131700 10.0kb downstream 10.0kb downstream 14265 true Chr12: 30071908-30086172 Gossypium raimondii
Gorai.012G131700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 30076173-30086172 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828602 5264 Brassicales-Malvales View MSA
124344172 5266 SBM View MSA
124241346 5268 Malvidae View MSA
124065311 5270 Rosid View MSA
123739176 5271 Pentapetalae View MSA
122786573 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain