Gene : Gorai.012G048200 G. raimondii v2.1
Defline:  (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  482
Name:  ? Gorai.012G048200 Secondary Identifier:  ? PAC:26828721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G048200 0.5kb upstream 0.5kb upstream 5700 true Chr12: 6119641-6125340 Gossypium raimondii
Gorai.012G048200 0.5kb upstream 0.5kb upstream 500 false Chr12: 6124841-6125340 Gossypium raimondii
Gorai.012G048200 0.5kb downstream 0.5kb downstream 5700 true Chr12: 6119141-6124840 Gossypium raimondii
Gorai.012G048200 0.5kb downstream 0.5kb downstream 500 false Chr12: 6119141-6119640 Gossypium raimondii
Gorai.012G048200 1.0kb upstream 1.0kb upstream 6200 true Chr12: 6119641-6125840 Gossypium raimondii
Gorai.012G048200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6124841-6125840 Gossypium raimondii
Gorai.012G048200 1.0kb downstream 1.0kb downstream 6200 true Chr12: 6118641-6124840 Gossypium raimondii
Gorai.012G048200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6118641-6119640 Gossypium raimondii
Gorai.012G048200 2.0kb upstream 2.0kb upstream 7200 true Chr12: 6119641-6126840 Gossypium raimondii
Gorai.012G048200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6124841-6126840 Gossypium raimondii
Gorai.012G048200 2.0kb downstream 2.0kb downstream 7200 true Chr12: 6117641-6124840 Gossypium raimondii
Gorai.012G048200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6117641-6119640 Gossypium raimondii
Gorai.012G048200 5.0kb upstream 5.0kb upstream 10200 true Chr12: 6119641-6129840 Gossypium raimondii
Gorai.012G048200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6124841-6129840 Gossypium raimondii
Gorai.012G048200 5.0kb downstream 5.0kb downstream 10200 true Chr12: 6114641-6124840 Gossypium raimondii
Gorai.012G048200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6114641-6119640 Gossypium raimondii
Gorai.012G048200 10.0kb upstream 10.0kb upstream 15200 true Chr12: 6119641-6134840 Gossypium raimondii
Gorai.012G048200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6124841-6134840 Gossypium raimondii
Gorai.012G048200 10.0kb downstream 10.0kb downstream 15200 true Chr12: 6109641-6124840 Gossypium raimondii
Gorai.012G048200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6109641-6119640 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
123834108 5264 Brassicales-Malvales View MSA
124340985 5266 SBM View MSA
124242304 5268 Malvidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain