Gene : Gorai.012G120000 G. raimondii v2.1
Defline:  (1 of 2) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  1200
Name:  ? Gorai.012G120000 Secondary Identifier:  ? PAC:26826610
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G120000 0.5kb upstream 0.5kb upstream 2821 true Chr12: 27474125-27476945 Gossypium raimondii
Gorai.012G120000 0.5kb upstream 0.5kb upstream 500 false Chr12: 27476446-27476945 Gossypium raimondii
Gorai.012G120000 0.5kb downstream 0.5kb downstream 2821 true Chr12: 27473625-27476445 Gossypium raimondii
Gorai.012G120000 0.5kb downstream 0.5kb downstream 500 false Chr12: 27473625-27474124 Gossypium raimondii
Gorai.012G120000 1.0kb upstream 1.0kb upstream 3321 true Chr12: 27474125-27477445 Gossypium raimondii
Gorai.012G120000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 27476446-27477445 Gossypium raimondii
Gorai.012G120000 1.0kb downstream 1.0kb downstream 3321 true Chr12: 27473125-27476445 Gossypium raimondii
Gorai.012G120000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 27473125-27474124 Gossypium raimondii
Gorai.012G120000 2.0kb upstream 2.0kb upstream 4321 true Chr12: 27474125-27478445 Gossypium raimondii
Gorai.012G120000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 27476446-27478445 Gossypium raimondii
Gorai.012G120000 2.0kb downstream 2.0kb downstream 4321 true Chr12: 27472125-27476445 Gossypium raimondii
Gorai.012G120000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 27472125-27474124 Gossypium raimondii
Gorai.012G120000 5.0kb upstream 5.0kb upstream 7321 true Chr12: 27474125-27481445 Gossypium raimondii
Gorai.012G120000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 27476446-27481445 Gossypium raimondii
Gorai.012G120000 5.0kb downstream 5.0kb downstream 7321 true Chr12: 27469125-27476445 Gossypium raimondii
Gorai.012G120000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 27469125-27474124 Gossypium raimondii
Gorai.012G120000 10.0kb upstream 10.0kb upstream 12321 true Chr12: 27474125-27486445 Gossypium raimondii
Gorai.012G120000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 27476446-27486445 Gossypium raimondii
Gorai.012G120000 10.0kb downstream 10.0kb downstream 12321 true Chr12: 27464125-27476445 Gossypium raimondii
Gorai.012G120000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 27464125-27474124 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837359 5264 Brassicales-Malvales View MSA
124322295 5266 SBM View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain