Gene : Gorai.012G046900 G. raimondii v2.1
Defline:  (1 of 2) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  469
Name:  ? Gorai.012G046900 Secondary Identifier:  ? PAC:26825402
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6441 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G046900 0.5kb upstream 0.5kb upstream 9480 true Chr12: 5873640-5883119 Gossypium raimondii
Gorai.012G046900 0.5kb upstream 0.5kb upstream 500 false Chr12: 5882620-5883119 Gossypium raimondii
Gorai.012G046900 0.5kb downstream 0.5kb downstream 9480 true Chr12: 5873140-5882619 Gossypium raimondii
Gorai.012G046900 0.5kb downstream 0.5kb downstream 500 false Chr12: 5873140-5873639 Gossypium raimondii
Gorai.012G046900 1.0kb upstream 1.0kb upstream 9980 true Chr12: 5873640-5883619 Gossypium raimondii
Gorai.012G046900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5882620-5883619 Gossypium raimondii
Gorai.012G046900 1.0kb downstream 1.0kb downstream 9980 true Chr12: 5872640-5882619 Gossypium raimondii
Gorai.012G046900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5872640-5873639 Gossypium raimondii
Gorai.012G046900 2.0kb upstream 2.0kb upstream 10980 true Chr12: 5873640-5884619 Gossypium raimondii
Gorai.012G046900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5882620-5884619 Gossypium raimondii
Gorai.012G046900 2.0kb downstream 2.0kb downstream 10980 true Chr12: 5871640-5882619 Gossypium raimondii
Gorai.012G046900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5871640-5873639 Gossypium raimondii
Gorai.012G046900 5.0kb upstream 5.0kb upstream 13980 true Chr12: 5873640-5887619 Gossypium raimondii
Gorai.012G046900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5882620-5887619 Gossypium raimondii
Gorai.012G046900 5.0kb downstream 5.0kb downstream 13980 true Chr12: 5868640-5882619 Gossypium raimondii
Gorai.012G046900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5868640-5873639 Gossypium raimondii
Gorai.012G046900 10.0kb upstream 10.0kb upstream 18980 true Chr12: 5873640-5892619 Gossypium raimondii
Gorai.012G046900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5882620-5892619 Gossypium raimondii
Gorai.012G046900 10.0kb downstream 10.0kb downstream 18980 true Chr12: 5863640-5882619 Gossypium raimondii
Gorai.012G046900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5863640-5873639 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827782 5264 Brassicales-Malvales View MSA
124338849 5266 SBM View MSA
124238946 5268 Malvidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain