Gene : Gorai.012G005100 G. raimondii v2.1
Defline:  (1 of 4) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  51
Name:  ? Gorai.012G005100 Secondary Identifier:  ? PAC:26828933
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CALVIN-PWY Gossypium raimondii pathologic  
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-5723 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G005100 0.5kb upstream 0.5kb upstream 836 true Chr12: 613874-614709 Gossypium raimondii
Gorai.012G005100 0.5kb upstream 0.5kb upstream 500 false Chr12: 613874-614373 Gossypium raimondii
Gorai.012G005100 0.5kb downstream 0.5kb downstream 836 true Chr12: 614374-615209 Gossypium raimondii
Gorai.012G005100 0.5kb downstream 0.5kb downstream 500 false Chr12: 614710-615209 Gossypium raimondii
Gorai.012G005100 1.0kb upstream 1.0kb upstream 1336 true Chr12: 613374-614709 Gossypium raimondii
Gorai.012G005100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 613374-614373 Gossypium raimondii
Gorai.012G005100 1.0kb downstream 1.0kb downstream 1336 true Chr12: 614374-615709 Gossypium raimondii
Gorai.012G005100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 614710-615709 Gossypium raimondii
Gorai.012G005100 2.0kb upstream 2.0kb upstream 2336 true Chr12: 612374-614709 Gossypium raimondii
Gorai.012G005100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 612374-614373 Gossypium raimondii
Gorai.012G005100 2.0kb downstream 2.0kb downstream 2336 true Chr12: 614374-616709 Gossypium raimondii
Gorai.012G005100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 614710-616709 Gossypium raimondii
Gorai.012G005100 5.0kb upstream 5.0kb upstream 5336 true Chr12: 609374-614709 Gossypium raimondii
Gorai.012G005100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 609374-614373 Gossypium raimondii
Gorai.012G005100 5.0kb downstream 5.0kb downstream 5336 true Chr12: 614374-619709 Gossypium raimondii
Gorai.012G005100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 614710-619709 Gossypium raimondii
Gorai.012G005100 10.0kb upstream 10.0kb upstream 10336 true Chr12: 604374-614709 Gossypium raimondii
Gorai.012G005100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 604374-614373 Gossypium raimondii
Gorai.012G005100 10.0kb downstream 10.0kb downstream 10336 true Chr12: 614374-624709 Gossypium raimondii
Gorai.012G005100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 614710-624709 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813563 5264 Brassicales-Malvales Singleton cluster - no MSA
124310095 5266 SBM Singleton cluster - no MSA
124159605 5268 Malvidae Singleton cluster - no MSA
124074092 5270 Rosid View MSA
123751375 5271 Pentapetalae View MSA
122794662 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain