Gene : Gorai.012G125900 G. raimondii v2.1
Defline:  (1 of 1) PTHR10683:SF6 - TRANSALDOLASE-RELATED Genomic Order:  1259
Name:  ? Gorai.012G125900 Secondary Identifier:  ? PAC:26826408
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii NONOXIPENT-PWY Gossypium raimondii pathologic  
Graimondii PENTOSE-P-PWY Gossypium raimondii pathologic  
Graimondii PWY-5723 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G125900 0.5kb upstream 0.5kb upstream 3466 true Chr12: 29074087-29077552 Gossypium raimondii
Gorai.012G125900 0.5kb upstream 0.5kb upstream 500 false Chr12: 29074087-29074586 Gossypium raimondii
Gorai.012G125900 0.5kb downstream 0.5kb downstream 3466 true Chr12: 29074587-29078052 Gossypium raimondii
Gorai.012G125900 0.5kb downstream 0.5kb downstream 500 false Chr12: 29077553-29078052 Gossypium raimondii
Gorai.012G125900 1.0kb upstream 1.0kb upstream 3966 true Chr12: 29073587-29077552 Gossypium raimondii
Gorai.012G125900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 29073587-29074586 Gossypium raimondii
Gorai.012G125900 1.0kb downstream 1.0kb downstream 3966 true Chr12: 29074587-29078552 Gossypium raimondii
Gorai.012G125900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 29077553-29078552 Gossypium raimondii
Gorai.012G125900 2.0kb upstream 2.0kb upstream 4966 true Chr12: 29072587-29077552 Gossypium raimondii
Gorai.012G125900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 29072587-29074586 Gossypium raimondii
Gorai.012G125900 2.0kb downstream 2.0kb downstream 4966 true Chr12: 29074587-29079552 Gossypium raimondii
Gorai.012G125900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 29077553-29079552 Gossypium raimondii
Gorai.012G125900 5.0kb upstream 5.0kb upstream 7966 true Chr12: 29069587-29077552 Gossypium raimondii
Gorai.012G125900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 29069587-29074586 Gossypium raimondii
Gorai.012G125900 5.0kb downstream 5.0kb downstream 7966 true Chr12: 29074587-29082552 Gossypium raimondii
Gorai.012G125900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 29077553-29082552 Gossypium raimondii
Gorai.012G125900 10.0kb upstream 10.0kb upstream 12966 true Chr12: 29064587-29077552 Gossypium raimondii
Gorai.012G125900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 29064587-29074586 Gossypium raimondii
Gorai.012G125900 10.0kb downstream 10.0kb downstream 12966 true Chr12: 29074587-29087552 Gossypium raimondii
Gorai.012G125900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 29077553-29087552 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827398 5264 Brassicales-Malvales View MSA
124337524 5266 SBM View MSA
124240084 5268 Malvidae View MSA
124064365 5270 Rosid View MSA
123743559 5271 Pentapetalae View MSA
122786857 5272 Eudicot View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain