Gene : Gorai.012G049000 G. raimondii v2.1

Defline:  (1 of 3) PTHR11652:SF19 - 30S RIBOSOMAL PROTEIN S12, CHLOROPLASTIC Genomic Order:  490
Name:  ? Gorai.012G049000 Secondary Identifier:  ? PAC:26826164

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G049000 0.5kb upstream 0.5kb upstream 899 true Chr12: 6422887-6423785 Gossypium raimondii
Gorai.012G049000 0.5kb upstream 0.5kb upstream 500 false Chr12: 6422887-6423386 Gossypium raimondii
Gorai.012G049000 0.5kb downstream 0.5kb downstream 899 true Chr12: 6423387-6424285 Gossypium raimondii
Gorai.012G049000 0.5kb downstream 0.5kb downstream 500 false Chr12: 6423786-6424285 Gossypium raimondii
Gorai.012G049000 1.0kb upstream 1.0kb upstream 1399 true Chr12: 6422387-6423785 Gossypium raimondii
Gorai.012G049000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6422387-6423386 Gossypium raimondii
Gorai.012G049000 1.0kb downstream 1.0kb downstream 1399 true Chr12: 6423387-6424785 Gossypium raimondii
Gorai.012G049000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6423786-6424785 Gossypium raimondii
Gorai.012G049000 2.0kb upstream 2.0kb upstream 2399 true Chr12: 6421387-6423785 Gossypium raimondii
Gorai.012G049000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6421387-6423386 Gossypium raimondii
Gorai.012G049000 2.0kb downstream 2.0kb downstream 2399 true Chr12: 6423387-6425785 Gossypium raimondii
Gorai.012G049000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6423786-6425785 Gossypium raimondii
Gorai.012G049000 5.0kb upstream 5.0kb upstream 5399 true Chr12: 6418387-6423785 Gossypium raimondii
Gorai.012G049000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6418387-6423386 Gossypium raimondii
Gorai.012G049000 5.0kb downstream 5.0kb downstream 5399 true Chr12: 6423387-6428785 Gossypium raimondii
Gorai.012G049000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6423786-6428785 Gossypium raimondii
Gorai.012G049000 10.0kb upstream 10.0kb upstream 10399 true Chr12: 6413387-6423785 Gossypium raimondii
Gorai.012G049000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6413387-6423386 Gossypium raimondii
Gorai.012G049000 10.0kb downstream 10.0kb downstream 10399 true Chr12: 6423387-6433785 Gossypium raimondii
Gorai.012G049000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6423786-6433785 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813165 5264 Brassicales-Malvales Singleton cluster - no MSA
124309717 5266 SBM Singleton cluster - no MSA
124159294 5268 Malvidae Singleton cluster - no MSA
123883532 5270 Rosid Singleton cluster - no MSA
123466285 5271 Pentapetalae Singleton cluster - no MSA
122501595 5272 Eudicot Singleton cluster - no MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain