Gene : Gorai.012G049400 G. raimondii v2.1
Defline:  (1 of 2) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  494
Name:  ? Gorai.012G049400 Secondary Identifier:  ? PAC:26828830
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1264 Gossypium raimondii pathologic  
Graimondii PWY-4381 Gossypium raimondii pathologic  
Graimondii PWY-5156 Gossypium raimondii pathologic  
Graimondii PWY-7388 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G049400 0.5kb upstream 0.5kb upstream 3513 true Chr12: 6445136-6448648 Gossypium raimondii
Gorai.012G049400 0.5kb upstream 0.5kb upstream 500 false Chr12: 6448149-6448648 Gossypium raimondii
Gorai.012G049400 0.5kb downstream 0.5kb downstream 3513 true Chr12: 6444636-6448148 Gossypium raimondii
Gorai.012G049400 0.5kb downstream 0.5kb downstream 500 false Chr12: 6444636-6445135 Gossypium raimondii
Gorai.012G049400 1.0kb upstream 1.0kb upstream 4013 true Chr12: 6445136-6449148 Gossypium raimondii
Gorai.012G049400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6448149-6449148 Gossypium raimondii
Gorai.012G049400 1.0kb downstream 1.0kb downstream 4013 true Chr12: 6444136-6448148 Gossypium raimondii
Gorai.012G049400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6444136-6445135 Gossypium raimondii
Gorai.012G049400 2.0kb upstream 2.0kb upstream 5013 true Chr12: 6445136-6450148 Gossypium raimondii
Gorai.012G049400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6448149-6450148 Gossypium raimondii
Gorai.012G049400 2.0kb downstream 2.0kb downstream 5013 true Chr12: 6443136-6448148 Gossypium raimondii
Gorai.012G049400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6443136-6445135 Gossypium raimondii
Gorai.012G049400 5.0kb upstream 5.0kb upstream 8013 true Chr12: 6445136-6453148 Gossypium raimondii
Gorai.012G049400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6448149-6453148 Gossypium raimondii
Gorai.012G049400 5.0kb downstream 5.0kb downstream 8013 true Chr12: 6440136-6448148 Gossypium raimondii
Gorai.012G049400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6440136-6445135 Gossypium raimondii
Gorai.012G049400 10.0kb upstream 10.0kb upstream 13013 true Chr12: 6445136-6458148 Gossypium raimondii
Gorai.012G049400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6448149-6458148 Gossypium raimondii
Gorai.012G049400 10.0kb downstream 10.0kb downstream 13013 true Chr12: 6435136-6448148 Gossypium raimondii
Gorai.012G049400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6435136-6445135 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836808 5264 Brassicales-Malvales View MSA
124350225 5266 SBM View MSA
124244588 5268 Malvidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain