Gene : Gorai.012G136800 G. raimondii v2.1
Defline:  (1 of 2) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Genomic Order:  1368
Name:  ? Gorai.012G136800 Secondary Identifier:  ? PAC:26828489
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1301 Gossypium raimondii pathologic  
Graimondii PWY-6527 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G136800 0.5kb upstream 0.5kb upstream 4780 true Chr12: 31018152-31022931 Gossypium raimondii
Gorai.012G136800 0.5kb upstream 0.5kb upstream 500 false Chr12: 31018152-31018651 Gossypium raimondii
Gorai.012G136800 0.5kb downstream 0.5kb downstream 4780 true Chr12: 31018652-31023431 Gossypium raimondii
Gorai.012G136800 0.5kb downstream 0.5kb downstream 500 false Chr12: 31022932-31023431 Gossypium raimondii
Gorai.012G136800 1.0kb upstream 1.0kb upstream 5280 true Chr12: 31017652-31022931 Gossypium raimondii
Gorai.012G136800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 31017652-31018651 Gossypium raimondii
Gorai.012G136800 1.0kb downstream 1.0kb downstream 5280 true Chr12: 31018652-31023931 Gossypium raimondii
Gorai.012G136800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 31022932-31023931 Gossypium raimondii
Gorai.012G136800 2.0kb upstream 2.0kb upstream 6280 true Chr12: 31016652-31022931 Gossypium raimondii
Gorai.012G136800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 31016652-31018651 Gossypium raimondii
Gorai.012G136800 2.0kb downstream 2.0kb downstream 6280 true Chr12: 31018652-31024931 Gossypium raimondii
Gorai.012G136800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 31022932-31024931 Gossypium raimondii
Gorai.012G136800 5.0kb upstream 5.0kb upstream 9280 true Chr12: 31013652-31022931 Gossypium raimondii
Gorai.012G136800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 31013652-31018651 Gossypium raimondii
Gorai.012G136800 5.0kb downstream 5.0kb downstream 9280 true Chr12: 31018652-31027931 Gossypium raimondii
Gorai.012G136800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 31022932-31027931 Gossypium raimondii
Gorai.012G136800 10.0kb upstream 10.0kb upstream 14280 true Chr12: 31008652-31022931 Gossypium raimondii
Gorai.012G136800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 31008652-31018651 Gossypium raimondii
Gorai.012G136800 10.0kb downstream 10.0kb downstream 14280 true Chr12: 31018652-31032931 Gossypium raimondii
Gorai.012G136800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 31022932-31032931 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835368 5264 Brassicales-Malvales View MSA
124322036 5266 SBM View MSA
124237729 5268 Malvidae View MSA
124069485 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain