Gene : Gorai.012G143500 G. raimondii v2.1
Defline:  (1 of 3) PTHR33088:SF9 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  1435
Name:  ? Gorai.012G143500 Secondary Identifier:  ? PAC:26826959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G143500 0.5kb upstream 0.5kb upstream 7523 true Chr12: 31718043-31725565 Gossypium raimondii
Gorai.012G143500 0.5kb upstream 0.5kb upstream 500 false Chr12: 31725066-31725565 Gossypium raimondii
Gorai.012G143500 0.5kb downstream 0.5kb downstream 7523 true Chr12: 31717543-31725065 Gossypium raimondii
Gorai.012G143500 0.5kb downstream 0.5kb downstream 500 false Chr12: 31717543-31718042 Gossypium raimondii
Gorai.012G143500 1.0kb upstream 1.0kb upstream 8023 true Chr12: 31718043-31726065 Gossypium raimondii
Gorai.012G143500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 31725066-31726065 Gossypium raimondii
Gorai.012G143500 1.0kb downstream 1.0kb downstream 8023 true Chr12: 31717043-31725065 Gossypium raimondii
Gorai.012G143500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 31717043-31718042 Gossypium raimondii
Gorai.012G143500 2.0kb upstream 2.0kb upstream 9023 true Chr12: 31718043-31727065 Gossypium raimondii
Gorai.012G143500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 31725066-31727065 Gossypium raimondii
Gorai.012G143500 2.0kb downstream 2.0kb downstream 9023 true Chr12: 31716043-31725065 Gossypium raimondii
Gorai.012G143500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 31716043-31718042 Gossypium raimondii
Gorai.012G143500 5.0kb upstream 5.0kb upstream 12023 true Chr12: 31718043-31730065 Gossypium raimondii
Gorai.012G143500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 31725066-31730065 Gossypium raimondii
Gorai.012G143500 5.0kb downstream 5.0kb downstream 12023 true Chr12: 31713043-31725065 Gossypium raimondii
Gorai.012G143500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 31713043-31718042 Gossypium raimondii
Gorai.012G143500 10.0kb upstream 10.0kb upstream 17023 true Chr12: 31718043-31735065 Gossypium raimondii
Gorai.012G143500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 31725066-31735065 Gossypium raimondii
Gorai.012G143500 10.0kb downstream 10.0kb downstream 17023 true Chr12: 31708043-31725065 Gossypium raimondii
Gorai.012G143500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 31708043-31718042 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841685 5264 Brassicales-Malvales View MSA
124348603 5266 SBM View MSA
124254318 5268 Malvidae View MSA
124071765 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain